How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA05G324060
Reference: TK1151 Chr: Chr05 Coordinates: 79901049-79903132 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1854 bp · TkA05G324060|TK1151|cDNA

TCATTGACGGCGGGCGGTTGGTGTGGTTAACACTTTCACTATAAATACACAATGCAATATGCTCATCTTCATCACAGACTTAATTACACCGACAATCAAATCCACTCTCCGGCGATAAAACACAAGATGTGGAGTTTCTTAGCGCCGGTGTCAATCTACACTTTGACGTTGTTTCTCGTTGCTTCCGTCGTGCTCTTCAAATGGTACAATTCTAAATCATCATCCAGTTCATCCGCCGCCAAGAACCTCCCCCCATCACC...

1632 bp · TkA05G324060|TK1151|CDS

ATGCAATATGCTCATCTTCATCACAGACTTAATTACACCGACAATCAAATCCACTCTCCGGCGATAAAACACAAGATGTGGAGTTTCTTAGCGCCGGTGTCAATCTACACTTTGACGTTGTTTCTCGTTGCTTCCGTCGTGCTCTTCAAATGGTACAATTCTAAATCATCATCCAGTTCATCCGCCGCCAAGAACCTCCCCCCATCACCACCAAAGTTACCGGTGATCGGCAACCTCCACCAGCTCGGTGCAAGCGTCCA...

543 aa · TkA05G324060|TK1151|PROTEIN

MQYAHLHHRLNYTDNQIHSPAIKHKMWSFLAPVSIYTLTLFLVASVVLFKWYNSKSSSSSSAAKNLPPSPPKLPVIGNLHQLGASVHHSFLSLARRYGDSLMLLHIGSVPSLVVSSTEAAREIMKTHDIAFASRPNTRMFRAISYNLKEITVAPYGEYWRQAKSILTLQLLSNKKVQTYNGLREKVISECVDKITDCFLANKPADLSDLFSSLTNDITCMATFGRTYNEGEIGKKFKKILQEFSEVLGSFYFEDSIPQLA...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA05G324060
TK1151 IDTkA05G324060
OH-1004 IDLXL04_020878
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.400
Protein coverage (%)TK1151 99.816 / OH-1004 99.816
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G324060
LocationChr05:79901049-79903132 (-)
DescriptionSimilar to CYP736A117: Cytochrome P450 736A117
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_020878 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0016114 terpenoid biosynthetic process Biological Process
GO:0035835 indole alkaloid biosynthetic process Biological Process
GO:0051762 sesquiterpene biosynthetic process Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004497 monooxygenase activity Molecular Function
GO:0005506 iron ion binding Molecular Function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Molecular Function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen Molecular Function
GO:0016829 lyase activity Molecular Function
GO:0020037 heme binding Molecular Function
GO:0102627 parthenolide 3beta-hydroxylase activity Molecular Function
KEGG gene cross-reference
ag:ADZ48681
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.920
Rank 1 · TkA05G324060 · TK1151
Cell membrane0.041
Rank 2 · TkA05G324060 · TK1151
Plastid0.041
Rank 3 · TkA05G324060 · TK1151
Cytoplasm0.038
Rank 4 · TkA05G324060 · TK1151
Golgi apparatus0.025
Rank 5 · TkA05G324060 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00067p45067-525 aa
PF14662KASH_CCD349-402 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G324060PF00067p450675251.3e-97328.2
TkA05G324060PF14662KASH_CCD3494020.2811.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser