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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA05G082420
Reference: TK1151 Chr: Chr05 Coordinates: 22322215-22328567 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3416 bp · TkA05G082420|TK1151|cDNA

AAAAGTTGTACGTAACTTAGGATTTATGTTTTCAGCTCTGGAGATATGCGTAGACCAAGTAGAATATTTAATTTATGAAATAAATAGATTTCGCACTTCGAAGAACAAAATTCAGATGAAAACTCCATGATCTGAGCTTCTGGGGAGAGAGAGAGAGAGAGAAAGAGAGCGGTTGGTGGTAAAGAAGATATAAATGAAGCGATGACATGTGGGTCAAGTATTGGTGCTTTCTCCCTTTTGGGCAAAGCAGAAACAACCAC...

CDS

Download CDS FASTA

2640 bp · TkA05G082420|TK1151|CDS

ATGGGGGCAATCGGAGGGGATGAGATTTTGAATTGGGAGAAAATGGATAATGGAAGAGAGGAGAAGATTCTTGTGTTGGTGAGATTGAGGCCGTTGAATGAAAAAGAAATTTCAAGAAATGATGTTTCGGATTGGGAGTGTATCAATGATACAACGATGCTATTTAGGAATAGTTTGCAGGAAAGATCCATGTTCCCTACTGCATATTCTTTTGACAGAGTATTTAGCGGTGATGCAACAACTAGGCAAGTGTATGATGA...

Protein

Download Protein FASTA

879 aa · TkA05G082420|TK1151|PROTEIN

MGAIGGDEILNWEKMDNGREEKILVLVRLRPLNEKEISRNDVSDWECINDTTMLFRNSLQERSMFPTAYSFDRVFSGDATTRQVYDEGAKGIALSVVSGINSSIFAYGQTSSGKTYTMMGITEYTVADIYDYMQKHEERAFVLKFSAIEIYNEAIRDLLSTENIPLRVLDDPEKGTIIERLTEETLRDWSHLKQLLSICEAQRKVGETSLNETSSRSHQILRLTIESSAREFIGKDKSTKLAASVNFVDLAGSERAAQAL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G082420
TK1151 IDTkA05G082420
OH-1004 IDLXL04_019746
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G082420
LocationChr05:22322215-22328567 (-)
DescriptionSimilar to KIN7E: Kinesin-like protein KIN-7E
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g21300 Kinesin-like protein KIN-7E. No verified direct reference in this release
At4g38950 Kinesin-like protein KIN-7F. No verified direct reference in this release
At3g51150 Kinesin-like protein KIN-7G. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0538800 Binds ATP/ADP in vitro. No verified direct reference in this release
Os02g0645100 Kinesin-like protein KIN-7C. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_019746 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005874 microtubule Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0003729 mRNA binding Molecular Function
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
KEGG gene cross-reference
ath:AT2G21300
ath:AT4G38950
dosa:Os02g0645100
dosa:Os04g0538800
dosa:Os09g0528000
osa:4347645
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.632
Rank 1 · TkA05G082420 · TK1151
Nucleus0.263
Rank 2 · TkA05G082420 · TK1151
Cell membrane0.168
Rank 3 · TkA05G082420 · TK1151
Golgi apparatus0.086
Rank 4 · TkA05G082420 · TK1151
Lysosome / Vacuole0.065
Rank 5 · TkA05G082420 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd23-159 aa
PF00225Kinesin28-344 aa
PF12329TMF_DNA_bd265-288 aa
PF14932HAUS-augmin3354-429 aa
PF12329TMF_DNA_bd358-375 aa
PF11995DUF3490359-370 aa
PF27954CCDC192360-418 aa
PF30842LEKR1360-460 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G082420PF16796Microtub_bd231599.4e-2175.0
TkA05G082420PF00225Kinesin283443.8e-97325.9
TkA05G082420PF12329TMF_DNA_bd2652880.01216.3
TkA05G082420PF14932HAUS-augmin33544290.1412.4
TkA05G082420PF12329TMF_DNA_bd3583750.01216.3
TkA05G082420PF11995DUF34903593708.5e-77257.2
TkA05G082420PF27954CCDC1923604180.999.7
TkA05G082420PF30842LEKR13604602.98.9
TkA05G082420PF16326ABC_tran_CTD3614050.3711.7
TkA05G082420PF12329TMF_DNA_bd3844260.01216.3
TkA05G082420PF17561TssO3854230.1812.4
TkA05G082420PF16796Microtub_bd3884269.4e-2175.0
TkA05G082420PF14932HAUS-augmin35135340.1412.4
TkA05G082420PF30842LEKR15155602.98.9
TkA05G082420PF12329TMF_DNA_bd5165340.01216.3
TkA05G082420PF16326ABC_tran_CTD5165320.3711.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4IGL2Arabidopsis thalianasp|F4IGL2|KN7E_ARATH Kinesin-like protein KIN-7E54.800%Swiss-ProtHigh
F4JUI9Arabidopsis thalianasp|F4JUI9|KN7F_ARATH Kinesin-like protein KIN-7F53.700%Swiss-ProtHigh
F4J394Arabidopsis thalianasp|F4J394|KN7G_ARATH Kinesin-like protein KIN-7G43.400%Swiss-ProtMedium
Q7X7H4Oryza sativa subsp. japonicasp|Q7X7H4|KN7F_ORYSJ Kinesin-like protein KIN-7F52.400%Swiss-ProtHigh
Q6H638Oryza sativa subsp. japonicasp|Q6H638|KN7C_ORYSJ Kinesin-like protein KIN-7C51.800%Swiss-ProtHigh

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