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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA05G081060
Reference: TK1151 Chr: Chr05 Coordinates: 21452248-21452640 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

393 bp · TkA05G081060|TK1151|cDNA

ATGCAGCTATTTAGCAATATCGTGCAAGATATTGTGGTGATTTCAGACACGAATAAATTTGGAATCGTTAGAGATGAACCCAAATGGAAATCTACAAACAATGTATTTGGGGGATCTAGGTCTTCATCAACTGTACAATCTTCCATTAACCTGGATAATGAAGTAGCTACAACTCGTTCAATTGGTAGGAATGCAGCAAAACAAGCAGCAAAAGGAAAAACTGCTAATTCTAGTTCGTCATCTAATAGCAGGCTTGATGA...

393 bp · TkA05G081060|TK1151|CDS

ATGCAGCTATTTAGCAATATCGTGCAAGATATTGTGGTGATTTCAGACACGAATAAATTTGGAATCGTTAGAGATGAACCCAAATGGAAATCTACAAACAATGTATTTGGGGGATCTAGGTCTTCATCAACTGTACAATCTTCCATTAACCTGGATAATGAAGTAGCTACAACTCGTTCAATTGGTAGGAATGCAGCAAAACAAGCAGCAAAAGGAAAAACTGCTAATTCTAGTTCGTCATCTAATAGCAGGCTTGATGA...

130 aa · TkA05G081060|TK1151|PROTEIN

MQLFSNIVQDIVVISDTNKFGIVRDEPKWKSTNNVFGGSRSSSTVQSSINLDNEVATTRSIGRNAAKQAAKGKTANSSSSSNSRLDEIFEKHIEGNQKSFERYQSSLDTKNALKGKKNSKLKKKNLKMKR

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G081060
TK1151 IDTkA05G081060
OH-1004 IDLXL04_020344
Relationship / confidenceMulti Candidate From Tk1151 / Complex relationship
Protein identity (%)89.600
Protein coverage (%)TK1151 73.846 / OH-1004 50.526
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G081060
LocationChr05:21452248-21452640 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_020344 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009407 toxin catabolic process Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005777 peroxisome Cellular Component
GO:0004364 glutathione transferase activity Molecular Function
KEGG gene cross-reference
ath:AT5G41240
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.550
Rank 1 · TkA05G081060 · TK1151
Cytoplasm0.347
Rank 2 · TkA05G081060 · TK1151
Mitochondrion0.070
Rank 3 · TkA05G081060 · TK1151
Cell membrane0.045
Rank 4 · TkA05G081060 · TK1151
Endoplasmic reticulum0.034
Rank 5 · TkA05G081060 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF14303NAM-associated41-122 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA05G081060PF14303NAM-associated411220.06614.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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