Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2133 bp · TkA05G046270|TK1151|cDNA
GAAAAGGAAACTACATCGATAGGTACACACGAAAAAGGAACAATTGATCAAACACTCTGACATGTGCACATCTCATGGACAAAGCGGCAGATAAATAAATACACGACTTGCGTTTGGTCAATTCTCCAAGGGAAAAACGCCAACCGGAATCTCCAAACGTCAACGACAAACGAACAAGTTCTCAGATAATCCAACGATTTAATACCCCTTCAAATATTCTCCCTACTTTTTTCTCTGGGTTTTTGTTCCTTTTCAGTTCA...
1560 bp · TkA05G046270|TK1151|CDS
ATGGAACAGCTAATTAAATTTATCATTCGACCACCCAGAGCTGAGTACAATCCGAAGAATGATTTGCTTGATCCAGAGTTCATGCTTAAAGGAAAATGGTATCAACGGAAAGATTTGGAGGTTATAAATAGCAGAGGATATGTTCTTCAATGCAGTCATTACATGCCAAATGTTCGCCCTGAAGGAAAGCCTCTCCCTTGTGTAATATACTGCCATGGCAACAGTGGTAGTCGTGCAGATGCTAGTGAAGCAGCTATAAT...
Protein
Download Protein FASTA519 aa · TkA05G046270|TK1151|PROTEIN
MEQLIKFIIRPPRAEYNPKNDLLDPEFMLKGKWYQRKDLEVINSRGYVLQCSHYMPNVRPEGKPLPCVIYCHGNSGSRADASEAAIILLPSNITVFTLDFSGSGLSGGDHVSLGWYEKQDLRAVVDHLRADGSVSLIGLWGRSMGAVTSLMYGAEDPSVAGMVLDSPFSDLVDLMMELVDTYKYRLPKFTVKFAIQYMRKVIIKKAKFDIVELNTIKVAKSSFVPVLFGHAVDDDFIQPHHSDRIYEAYMGDKNIIKFEG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G046270 |
|---|---|
| TK1151 ID | TkA05G046270 |
| OH-1004 ID | LXL04_019363 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 97.200 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G046270 |
|---|---|
| Location | Chr05:12201526-12205621 (+) |
| Description | Similar to yqkD: Uncharacterized protein YqkD (Bacillus subtilis (strain 168) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0002084 protein depalmitoylation Biological Process GO:0005737 cytoplasm Cellular Component GO:0005886 plasma membrane Cellular Component GO:0016020 membrane Cellular Component GO:0008474 palmitoyl-(protein) hydrolase activity Molecular Function |
| KEGG gene cross-reference | bsu:BSU23640 dre:561333 gga:418763 mmu:68904 xla:432053 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02129Peptidase_S1546-173 aaPF00756Esterase53-75 aaPF12146Hydrolase_464-174 aaPF00561Abhydrolase_166-188 aaPF12697Abhydrolase_669-172 aaPF00326Peptidase_S994-246 aaPF03959FSH1122-267 aaPF00756Esterase135-163 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G046270 | PF02129 | Peptidase_S15 | 46 | 173 | 4.4e-05 | 24.0 |
| TkA05G046270 | PF00756 | Esterase | 53 | 75 | 0.21 | 12.1 |
| TkA05G046270 | PF12146 | Hydrolase_4 | 64 | 174 | 3.3e-13 | 50.2 |
| TkA05G046270 | PF00561 | Abhydrolase_1 | 66 | 188 | 5.2e-09 | 36.8 |
| TkA05G046270 | PF12697 | Abhydrolase_6 | 69 | 172 | 0.0003 | 22.2 |
| TkA05G046270 | PF00326 | Peptidase_S9 | 94 | 246 | 0.036 | 14.3 |
| TkA05G046270 | PF03959 | FSH1 | 122 | 267 | 0.06 | 13.7 |
| TkA05G046270 | PF00756 | Esterase | 135 | 163 | 0.21 | 12.1 |
| TkA05G046270 | PF12146 | Hydrolase_4 | 219 | 256 | 3.3e-13 | 50.2 |
| TkA05G046270 | PF02129 | Peptidase_S15 | 220 | 262 | 4.4e-05 | 24.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.