Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2101 bp · TkA05G001850|TK1151|cDNA
AAAAGATAGTTTACAACCCGTAAGGCATGAGGGTAAAATTGTACCTGTGAGGCTGTTAACCTTGACATATAAAACGATACCCCCGTTGGCTCACAATGTCTTCGCGAATCTCGATCTGCCTCGTGGTCGCCGGATTTTAATCGTTGTTGCAGCAGTCCTCTTGAGATAACTGAGCGTCAATTTGGTTCTGTGGTCTTAAATGCTTCTCCTTGCTGCTAGAAATCGTTCGAATTTTTTGTTAATTGTGATTTTGAGATACA...
927 bp · TkA05G001850|TK1151|CDS
ATGTGTAATGGAAAAACTAAAGGAGACTGTTATCATTATCGTGTAATGGGTGTTCAAGCTCACAAGAAAGAGTTAGTTATGGGGATAAAACCTGGAATGAAGCTGTTTCTTTTTGATTTTGATGTGAAGCTTTTATATGGAATATATAGAGCATCTTCACATGGTGGCATGAAACTTGAACCTGCTGCTTTTGGTGGGGCCTTTCCTCTTCAGGTTCGTTTTGAGGTTTATAAAGACTGTCTTCCATTACCTGAGAGTGT...
Protein
Download Protein FASTA308 aa · TkA05G001850|TK1151|PROTEIN
MCNGKTKGDCYHYRVMGVQAHKKELVMGIKPGMKLFLFDFDVKLLYGIYRASSHGGMKLEPAAFGGAFPLQVRFEVYKDCLPLPESVFKKAIRESYDERTHKFKTELTIDQVNRLTNLFKSSPLLQHHSNPPPVHVIQDPHRPQKSTLTPPPLLLSEHQYRNYGLRPIERHNNFRPAQDREPARPDPVTLTKHEYRSDCPDSLFLSEKDYRTYGLKRQQETPIIDTNTVSIPPLGLYEPTSSLVERYLPSSYQYESVENE...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G001850 |
|---|---|
| TK1151 ID | TkA05G001850 |
| OH-1004 ID | LXL04_018858 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 63.900Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G001850 |
|---|---|
| Location | Chr05:507596-511399 (-) |
| Description | Similar to B2 protein |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009414 response to water deprivation Biological Process GO:0034976 response to endoplasmic reticulum stress Biological Process GO:0043067 regulation of programmed cell death Biological Process GO:0071456 cellular response to hypoxia Biological Process GO:1902074 response to salt Biological Process GO:1904350 regulation of protein catabolic process in the vacuole Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component |
| KEGG gene cross-reference | ath:AT5G42050 gmx:100808989 gmx:547685 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF10539Dev_Cell_Death1-119 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G001850 | PF10539 | Dev_Cell_Death | 1 | 119 | 4.3e-44 | 150.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.