Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1029 bp · TkA04G390050|TK1151|cDNA
ATGGTCTATGGAGATAAAGAAGACGTTTGCCAAGATCGCATTGCTTGGGTGAAGATTATCGGCCTCCCGATTAAGCACTGGTCAGAAGAAAATTTCTCATTGATAACCAAGTCGTTCGGGAAAATTATTGTTCCTTCCGACGAATTTGGCTCCAATGTGGATTCGTCGATTATCAAGCTCGGCTTGCTTTCGAAACTTCGTCACTGGATTAACGACGAAATCGCGGTCTCTGTAGGAGGGATATGCTTAAACGTGGGAGT...
1029 bp · TkA04G390050|TK1151|CDS
ATGGTCTATGGAGATAAAGAAGACGTTTGCCAAGATCGCATTGCTTGGGTGAAGATTATCGGCCTCCCGATTAAGCACTGGTCAGAAGAAAATTTCTCATTGATAACCAAGTCGTTCGGGAAAATTATTGTTCCTTCCGACGAATTTGGCTCCAATGTGGATTCGTCGATTATCAAGCTCGGCTTGCTTTCGAAACTTCGTCACTGGATTAACGACGAAATCGCGGTCTCTGTAGGAGGGATATGCTTAAACGTGGGAGT...
Protein
Download Protein FASTA342 aa · TkA04G390050|TK1151|PROTEIN
MVYGDKEDVCQDRIAWVKIIGLPIKHWSEENFSLITKSFGKIIVPSDEFGSNVDSSIIKLGLLSKLRHWINDEIAVSVGGICLNVGVVEYKRSWSPFSLEVEPSEASSDDDGNSVGISDTDMDGDKESCSDHLEEGEIPVYSESVPEVMNMDPVLSGNAQSPMVPETIEIPDTSTNPTHLLPNDEKNDHRGDVHLESGNHNPNVDGHVGNHVEYRGLLNNLNLLPGFGPFPSTIPPTHQPKPVHNLPPAQLDSQTTPFGA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G390050 |
|---|---|
| TK1151 ID | TkA04G390050 |
| OH-1004 ID | LXL04_038112 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 99.300 |
| Protein coverage (%) | TK1151 84.503 / OH-1004 19.633Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G390050 |
|---|---|
| Location | Chr04:98119143-98120171 (+) |
| Description | Similar to At2g32990: Endoglucanase 11 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0030245 cellulose catabolic process Biological Process GO:0071555 cell wall organization Biological Process GO:0005576 extracellular region Cellular Component GO:0008810 cellulase activity Molecular Function |
| KEGG gene cross-reference | ath:AT2G32990 dosa:Os02g0151300 dosa:Os02g0738600 dosa:Os06g0247900 dosa:Os09g0394300 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.