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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA04G137060
Reference: TK1151 Chr: Chr04 Coordinates: 35606247-35607436 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

321 bp · TkA04G137060|TK1151|cDNA

ATGCTTCATTGGCGGGGCAAACTACTTCTGATGCTGGATGCTGACGGGGCAACCAAAGCTGATGACATGGAAAAACTCGAAAAACAGAGGAAATGGTACGGAAACTTTTTGATGAAAGGGTTCCATGTTGTGGTCCTTCTTGCTGCGGGCCCCGGAGTTCGTGATACACACGTTGGTTGCAAAGTTGTTGGGATGCACTTGGCTGGACGAGGACTGATGGATGCAGCAGGTAGAAGTAGTGAATGGGAGAAGAAGTCTTT...

CDS

Download CDS FASTA

321 bp · TkA04G137060|TK1151|CDS

ATGCTTCATTGGCGGGGCAAACTACTTCTGATGCTGGATGCTGACGGGGCAACCAAAGCTGATGACATGGAAAAACTCGAAAAACAGAGGAAATGGTACGGAAACTTTTTGATGAAAGGGTTCCATGTTGTGGTCCTTCTTGCTGCGGGCCCCGGAGTTCGTGATACACACGTTGGTTGCAAAGTTGTTGGGATGCACTTGGCTGGACGAGGACTGATGGATGCAGCAGGTAGAAGTAGTGAATGGGAGAAGAAGTCTTT...

Protein

Download Protein FASTA

106 aa · TkA04G137060|TK1151|PROTEIN

MLHWRGKLLLMLDADGATKADDMEKLEKQRKWYGNFLMKGFHVVVLLAAGPGVRDTHVGCKVVGMHLAGRGLMDAAGRSSEWEKKSLTVLAGGIVHLGGIGNCNET

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA04G137060
TK1151 IDTkA04G137060
OH-1004 IDLXL04_035363
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)72.900
Protein coverage (%)TK1151 100.000 / OH-1004 50.542
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G137060
LocationChr04:35606247-35607436 (-)
DescriptionSimilar to ALG5A: Dolichyl-phosphate beta-glucosyltransferase ALG5A
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_035363 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006487 protein N-linked glycosylation Biological Process
GO:0006488 dolichol-linked oligosaccharide biosynthetic process Biological Process
GO:0007009 plasma membrane organization Biological Process
GO:0007029 endoplasmic reticulum organization Biological Process
GO:0007368 determination of left/right symmetry Biological Process
GO:0007379 segment specification Biological Process
GO:0009953 dorsal/ventral pattern formation Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0098554 cytoplasmic side of endoplasmic reticulum membrane Cellular Component
GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane Cellular Component
GO:0004581 dolichyl-phosphate beta-glucosyltransferase activity Molecular Function
KEGG gene cross-reference
dme:Dmel_CG7870
mmu:66248
tva:4764425
tva:4764889
tva:4772265
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.359
Rank 1 · TkA04G137060 · TK1151
Nucleus0.294
Rank 2 · TkA04G137060 · TK1151
Mitochondrion0.260
Rank 3 · TkA04G137060 · TK1151
Cell membrane0.119
Rank 4 · TkA04G137060 · TK1151
Endoplasmic reticulum0.076
Rank 5 · TkA04G137060 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

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