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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA04G017670
Reference: TK1151 Chr: Chr04 Coordinates: 4410686-4414782 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2262 bp · TkA04G017670|TK1151|cDNA

ACATATTAAAGGGGATGTATATCGCAAGAATGTAACCTAGAAATAAAGCTTTAAGCTTGTCTTGTTCCCAGTGATAAATCGTAGCAGTCTTCACAGCAACTGTAAATCAATGGCGACATCTCTGAGCACGCCAAAGCTCACCACGACGCTGTCTTCTTCAACACTTCAAACACTCCTCTCCAGACACAAATTCTCAAACCTGAATCGTTCTCCATTCATTATCTCTCCGCAATCATCATCTTCATCTTGTTATTCATCTA...

CDS

Download CDS FASTA

1716 bp · TkA04G017670|TK1151|CDS

ATGGCGACATCTCTGAGCACGCCAAAGCTCACCACGACGCTGTCTTCTTCAACACTTCAAACACTCCTCTCCAGACACAAATTCTCAAACCTGAATCGTTCTCCATTCATTATCTCTCCGCAATCATCATCTTCATCTTGTTATTCATCTAGCTTCAGTCTCTCGAAAAAAGCCCTAGGCTTTCTCTCCGACCACCGCCGGCATGCTGTACTCAAGTCTCGGAGATTCTCCACCAGAGCGGAGTCGACTAACGGCGCCGA...

Protein

Download Protein FASTA

571 aa · TkA04G017670|TK1151|PROTEIN

MATSLSTPKLTTTLSSSTLQTLLSRHKFSNLNRSPFIISPQSSSSSCYSSSFSLSKKALGFLSDHRRHAVLKSRRFSTRAESTNGAEPRHYDFDLFTIGAGSGGVRASRFAANFGASVAVCELPFSTISSDTTGGVGGTCVLRGCVPKKLLVYASKYSHEFEESLGFGWSYGSEPTHDWSTLMANKNAELQRLTGIYKNILNNAGVKLIEGRGKIVDPHTVDVDGKLYTARNILVSVGGRPFVPDIPGKEHVIDSDAALD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA04G017670
TK1151 IDTkA04G017670
OH-1004 IDLXL04_036917
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G017670
LocationChr04:4410686-4414782 (-)
DescriptionSimilar to GOR: Glutathione reductase, chloroplastic (Fragment)
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g54660 Catalyzes the reduction of glutathione disulfide (GSSG) to reduced glutathione (GSH) (By similarity). No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_036917 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006749 glutathione metabolic process Biological Process
GO:0034599 cellular response to oxidative stress Biological Process
GO:0045454 cell redox homeostasis Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005829 cytosol Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009570 chloroplast stroma Cellular Component
GO:0004362 glutathione-disulfide reductase (NADPH) activity Molecular Function
GO:0004791 thioredoxin-disulfide reductase (NADPH) activity Molecular Function
GO:0005507 copper ion binding Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT3G54660
gmx:547793
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.863
Rank 1 · TkA04G017670 · TK1151
Mitochondrion0.202
Rank 2 · TkA04G017670 · TK1151
Cytoplasm0.035
Rank 3 · TkA04G017670 · TK1151
Nucleus0.018
Rank 4 · TkA04G017670 · TK1151
Cell membrane0.012
Rank 5 · TkA04G017670 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13434Lys_Orn_oxgnase14-41 aa
PF028262-Hacid_dh_C93-121 aa
PF07992Pyr_redox_294-416 aa
PF03486HI0933_like94-127 aa
PF00070Pyr_redox96-122 aa
PF01262AlaDh_PNT_C96-123 aa
PF13738Pyr_redox_398-121 aa
PF00070Pyr_redox200-213 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA04G017670PF13434Lys_Orn_oxgnase14410.0001621.6
TkA04G017670PF028262-Hacid_dh_C931210.05713.5
TkA04G017670PF07992Pyr_redox_2944161.4e-68232.2
TkA04G017670PF03486HI0933_like941270.0008719.6
TkA04G017670PF00070Pyr_redox961227.7e-2484.7
TkA04G017670PF01262AlaDh_PNT_C961230.0009919.3
TkA04G017670PF13738Pyr_redox_3981212.4e-1040.9
TkA04G017670PF00070Pyr_redox2002137.7e-2484.7
TkA04G017670PF13738Pyr_redox_32184002.4e-1040.9
TkA04G017670PF13434Lys_Orn_oxgnase2232810.0001621.6
TkA04G017670PF01262AlaDh_PNT_C2643090.0009919.3
TkA04G017670PF028262-Hacid_dh_C2643010.05713.5
TkA04G017670PF00070Pyr_redox2673447.7e-2484.7
TkA04G017670PF03486HI0933_like3065050.0008719.6
TkA04G017670PF02852Pyr_redox_dim4365444.8e-33114.4
TkA04G017670PF028262-Hacid_dh_C4865210.05713.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
P42770Arabidopsis thalianasp|P42770|GSHRP_ARATH Glutathione reductase, chloroplastic75.700%Swiss-ProtHigh

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