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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G591410
Reference: TK1151 Chr: Chr03 Coordinates: 150234513-150236848 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1563 bp · TkA03G591410|TK1151|cDNA

TTTCAGCATCCAAACAAGAGCCTAGAACTAGGATCGGTGAGGTTGAAGGGTGTGGGAGCTAACATATCTAAAGTATTTGGGAACTTCAATCAAGCGAGCAAGGAAATTTTTAAAACAACTGTTTTTGAACCGTTTATCAGGACACTTCCATTTAAAGGTGAAGGGTTCCTTTGTCATATGATGTTGTTGCATGAGATCCAACCAACAGAAGAATCAGTAGCTGAAAAAAGGATGTATTTTAGAGTTGGAGAGAAGACAAT...

1563 bp · TkA03G591410|TK1151|CDS

TTTCAGCATCCAAACAAGAGCCTAGAACTAGGATCGGTGAGGTTGAAGGGTGTGGGAGCTAACATATCTAAAGTATTTGGGAACTTCAATCAAGCGAGCAAGGAAATTTTTAAAACAACTGTTTTTGAACCGTTTATCAGGACACTTCCATTTAAAGGTGAAGGGTTCCTTTGTCATATGATGTTGTTGCATGAGATCCAACCAACAGAAGAATCAGTAGCTGAAAAAAGGATGTATTTTAGAGTTGGAGAGAAGACAAT...

520 aa · TkA03G591410|TK1151|PROTEIN

FQHPNKSLELGSVRLKGVGANISKVFGNFNQASKEIFKTTVFEPFIRTLPFKGEGFLCHMMLLHEIQPTEESVAEKRMYFRVGEKTISYGAKEFCLITGFMFGKNIEPKKMFNFKGTQSKFGARVFPYTPEEEVTVSQLGQLLQKALDMLDIQDVDVVRLGLFYILCKGILGKDGCDKVCVEWFLLVDDLQAWDRYAGLFLFSFPWGSYLFCHAYKCMQECFGKIKNLTQSVSGYTVPFRIWIWEMLPQLSLINAARMST...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G591410
TK1151 IDTkA03G591410
OH-1004 IDLXL04_006170
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)75.300
Protein coverage (%)TK1151 95.962 / OH-1004 72.914
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene IDTkA03G591410
LocationChr03:150234513-150236848 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_006170 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)No functional description available
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.868
Rank 1 · TkA03G591410 · TK1151
Cytoplasm0.222
Rank 2 · TkA03G591410 · TK1151
Cell membrane0.030
Rank 3 · TkA03G591410 · TK1151
Mitochondrion0.022
Rank 4 · TkA03G591410 · TK1151
Endoplasmic reticulum0.020
Rank 5 · TkA03G591410 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF09331DUF198575-211 aa
PF10536PMD158-317 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G591410PF09331DUF1985752111.2e-0939.0
TkA03G591410PF10536PMD1583170.0004420.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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