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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G591250
Reference: TK1151 Chr: Chr03 Coordinates: 150193166-150197483 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

684 bp · TkA03G591250|TK1151|cDNA

ATGAACGAAGCTCCCTCATCAAACAACCATTACATTGTATACAGCATCGGGAGACCGCAAATGGACTACGAGAAGATAACCAAATACTCACCGCAGGGAAGTGGGGGAGGAGGTCTGTCGCCTGCGAAACTGAGGAACATGTTGAAGAGAAAGAAGAAACAAGGGGAAGATGAACTCGAGTCTACTTTCTCTTTGGGATCTCAAGTTTCTGAGGTTGACGATTCTGGTGATTGTTTAGAGAATTACAAAGATGTTGATGT...

CDS

Download CDS FASTA

684 bp · TkA03G591250|TK1151|CDS

ATGAACGAAGCTCCCTCATCAAACAACCATTACATTGTATACAGCATCGGGAGACCGCAAATGGACTACGAGAAGATAACCAAATACTCACCGCAGGGAAGTGGGGGAGGAGGTCTGTCGCCTGCGAAACTGAGGAACATGTTGAAGAGAAAGAAGAAACAAGGGGAAGATGAACTCGAGTCTACTTTCTCTTTGGGATCTCAAGTTTCTGAGGTTGACGATTCTGGTGATTGTTTAGAGAATTACAAAGATGTTGATGT...

Protein

Download Protein FASTA

227 aa · TkA03G591250|TK1151|PROTEIN

MNEAPSSNNHYIVYSIGRPQMDYEKITKYSPQGSGGGGLSPAKLRNMLKRKKKQGEDELESTFSLGSQVSEVDDSGDCLENYKDVDVVSVLPKHTLDTLLQGADNDNRSKDHPSLSSKIEAHDDGDLDYESGIDKVNVSSPFEKALEEDRTRLGLVERHKHDLLQPYPFLHEKPGVFWENKGVCMHRVFNYTKINIAFWFSPSGFDKTYEGDDSTKDYAQFHGGSWE

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G591250
TK1151 IDTkA03G591250
OH-1004 IDLXL04_011018
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)93.700
Protein coverage (%)TK1151 55.507 / OH-1004 25.709
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G591250
LocationChr03:150193166-150197483 (-)
DescriptionSimilar to REM4.1: Remorin 4.1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_011018 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009414 response to water deprivation Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009751 response to salicylic acid Biological Process
GO:0010555 response to mannitol Biological Process
GO:0051607 defense response to virus Biological Process
GO:0051665 membrane raft localization Biological Process
GO:1900458 negative regulation of brassinosteroid mediated signaling pathway Biological Process
GO:0000325 plant-type vacuole Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
KEGG gene cross-reference
ath:AT2G41870
ath:AT3G57540
ath:AT3G61260
ath:AT5G23750
dosa:Os07g0569100
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.390
Rank 1 · TkA03G591250 · TK1151
Cytoplasm0.380
Rank 2 · TkA03G591250 · TK1151
Cell membrane0.188
Rank 3 · TkA03G591250 · TK1151
Endoplasmic reticulum0.097
Rank 4 · TkA03G591250 · TK1151
Mitochondrion0.092
Rank 5 · TkA03G591250 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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