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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G434470
Reference: TK1151 Chr: Chr03 Coordinates: 108107488-108111992 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2722 bp · TkA03G434470|TK1151|cDNA

CTATATCTATGTATGGAACAGAGAAAAAGGTCCTAAAAAGCCCACCTCTTTAATTTCTTAATCTCTGTCCTCTTCAATGGCAGCAAAACCCCATGTGGAAAGCACTAAATGCGTTCAAACTTTATTTTTCTGAAGATTTCTCTCACATACTGACATTAAATTTCAACTACCTACATCAGATTTTGTTCTTTTTCCTCCAAATCATTTAAAGATTTGGTTTCAAATGAACATTTGTCGGTGTTCTATCTTCAAAAGCTTCA...

CDS

Download CDS FASTA

2229 bp · TkA03G434470|TK1151|CDS

ATGGCGAGTTGGAGGTTTTATTCCCTGCTGTTCTTGGCACTTTCATGGAGCTTGTTCATCTTCACAAATGCGATCCAACCTTCACAGAAACAAGTCCTCCTGCAACTTCGAAAACAGCTCGAATACCCGAAGCAATTAGACATTTGGCTCGATTCAAGTACTGATTTCTGCTACGTTTCTTCGCCGGAAGTCAATGTCACTTGCGAAAACAATTTCGTTTCGGAGCTTAAAATCATCGGGATTCCGGCCGATCAAACGCC...

Protein

Download Protein FASTA

742 aa · TkA03G434470|TK1151|PROTEIN

MASWRFYSLLFLALSWSLFIFTNAIQPSQKQVLLQLRKQLEYPKQLDIWLDSSTDFCYVSSPEVNVTCENNFVSELKIIGIPADQTPTKKVINSGLFHGFPVPSQTLSQNFSIDSLIATLSRLTSLKVLSLVSLGIWGPLPNKIQRLNTLEYIDLSYNFLYGSIPPTFSRMVSLQSVNLDGNFLNGSFPKGVDLLSSLTGLSLSENEFSGPLPDLKDLPNSLIILYLNNNSFSGQIPVNYGQLNNLQELDLSFNSLYGVP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G434470
TK1151 IDTkA03G434470
OH-1004 IDLXL04_013223
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)50.400
Protein coverage (%)TK1151 98.113 / OH-1004 98.318
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G434470
LocationChr03:108107488-108111992 (-)
DescriptionSimilar to At3g03770: Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g03770 Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770. No verified direct reference in this release
At1g14390 Probable LRR receptor-like serine/threonine-protein kinase At1g14390. No verified direct reference in this release
At2g02780 Probable LRR receptor-like serine/threonine-protein kinase At2g02780. No verified direct reference in this release
At2g21480 Probable receptor-like protein kinase At2g21480. No verified direct reference in this release
At3g46290 Receptor-like protein kinase required for cell elongation during vegetative growth, mostly in a brassinosteroid-(BR-) independent manner.
Three related receptor-like kinases are required for optimal cell elongation in Arabidopsis thaliana.2009 · DOI: 10.1073/pnas.0812346106

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013223 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009556 microsporogenesis Biological Process
GO:0010234 anther wall tapetum cell fate specification Biological Process
GO:0045088 regulation of innate immune response Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0019199 transmembrane receptor protein kinase activity Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT1G14390
ath:AT2G02780
ath:AT3G03770
ath:AT5G07280
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.810
Rank 1 · TkA03G434470 · TK1151
Endoplasmic reticulum0.084
Rank 2 · TkA03G434470 · TK1151
Cytoplasm0.065
Rank 3 · TkA03G434470 · TK1151
Nucleus0.049
Rank 4 · TkA03G434470 · TK1151
Lysosome / Vacuole0.046
Rank 5 · TkA03G434470 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01699Na_Ca_ex5-22 aa
PF08263LRRNT_227-57 aa
PF01699Na_Ca_ex96-127 aa
PF13855LRR_8107-132 aa
PF12799LRR_4112-131 aa
PF23598LRR_14117-302 aa
PF00560LRR_1125-147 aa
PF13855LRR_8125-182 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G434470PF01699Na_Ca_ex5220.007916.9
TkA03G434470PF08263LRRNT_227570.08913.8
TkA03G434470PF01699Na_Ca_ex961270.007916.9
TkA03G434470PF13855LRR_81071324.6e-1143.0
TkA03G434470PF12799LRR_41121314.7e-1040.1
TkA03G434470PF23598LRR_141173024.4e-0729.7
TkA03G434470PF00560LRR_11251471.7e-1451.5
TkA03G434470PF13855LRR_81251824.6e-1143.0
TkA03G434470PF13516LRR_61481581.99.4
TkA03G434470PF12799LRR_41491844.7e-1040.1
TkA03G434470PF00560LRR_11501711.7e-1451.5
TkA03G434470PF00560LRR_11731911.7e-1451.5
TkA03G434470PF13516LRR_61731821.99.4
TkA03G434470PF13855LRR_81952314.6e-1143.0
TkA03G434470PF13516LRR_61962091.99.4
TkA03G434470PF00560LRR_11972141.7e-1451.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8LFN2Arabidopsis thalianasp|Q8LFN2|Y3037_ARATH Probable inactive leucine-rich repeat receptor-like protein kinase At3g0377037.700%Swiss-ProtMedium
Q9M9S4Arabidopsis thalianasp|Q9M9S4|Y1143_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g1439031.700%Swiss-ProtMedium
C0LGJ9Arabidopsis thalianasp|C0LGJ9|Y2278_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g0278033.900%Swiss-ProtLow
Q9SJT0Arabidopsis thalianasp|Q9SJT0|Y2214_ARATH Probable receptor-like protein kinase At2g2148034.100%Swiss-ProtLow
Q9LX66Arabidopsis thalianasp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 131.800%Swiss-ProtLow

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