How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G164130
Reference: TK1151 Chr: Chr03 Coordinates: 41636016-41637899 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1584 bp · TkA03G164130|TK1151|cDNA

TTAGAGCAGCTTCCGATCTTCACTTTGCCGTTATTTCTTGGCGCTGCATTCCTACTCTTCAGATGTTACAATTCTAAATCACAGTCCACCAAGAAACTACCACCGTCACCACCAACATGGCCGATCATCGGCAACCTCCACCAGATTGGTGTACTCGTCCATCACTCGTTTCTATCTCTAGCCCAACGCTATGGTGACTCGTTCATGCTTCTCTACCTCGGCTCAGTCCCAAGCCTGGTGGTCTCGTCAGCAGAAGCCGC...

687 bp · TkA03G164130|TK1151|CDS

TTAGAGCAGCTTCCGATCTTCACTTTGCCGTTATTTCTTGGCGCTGCATTCCTACTCTTCAGATGTTACAATTCTAAATCACAGTCCACCAAGAAACTACCACCGTCACCACCAACATGGCCGATCATCGGCAACCTCCACCAGATTGGTGTACTCGTCCATCACTCGTTTCTATCTCTAGCCCAACGCTATGGTGACTCGTTCATGCTTCTCTACCTCGGCTCAGTCCCAAGCCTGGTGGTCTCGTCAGCAGAAGCCGC...

228 aa · TkA03G164130|TK1151|PROTEIN

LEQLPIFTLPLFLGAAFLLFRCYNSKSQSTKKLPPSPPTWPIIGNLHQIGVLVHHSFLSLAQRYGDSFMLLYLGSVPSLVVSSAEAAHEIMKTHDIAFASRPSTRMFRTISYDLKELTLAPYGEYWRQAKSILTVQLLSNKKVRTFDGLTEMVIADCVHKITECFLSNKPADLSNLFCSLSNDVTCLATFGRTYNEGEIGGNSRKSCKISWRCWVVFIWRIHFLSCGG

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA03G164130
TK1151 IDTkA03G164130
OH-1004 IDLXL04_007395
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)96.100
Protein coverage (%)TK1151 89.912 / OH-1004 35.875
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G164130
LocationChr03:41636016-41637899 (-)
DescriptionSimilar to CYP736A117: Cytochrome P450 736A117
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_007395 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009821 alkaloid biosynthetic process Biological Process
GO:0016114 terpenoid biosynthetic process Biological Process
GO:0035835 indole alkaloid biosynthetic process Biological Process
GO:0051762 sesquiterpene biosynthetic process Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004497 monooxygenase activity Molecular Function
GO:0005506 iron ion binding Molecular Function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Molecular Function
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen Molecular Function
GO:0016829 lyase activity Molecular Function
GO:0020037 heme binding Molecular Function
KEGG gene cross-reference
ag:ADZ48681
ag:UQZ09624
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.927
Rank 1 · TkA03G164130 · TK1151
Cytoplasm0.035
Rank 2 · TkA03G164130 · TK1151
Cell membrane0.031
Rank 3 · TkA03G164130 · TK1151
Plastid0.028
Rank 4 · TkA03G164130 · TK1151
Golgi apparatus0.026
Rank 5 · TkA03G164130 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00067p45034-195 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G164130PF00067p450341951.1e-2074.6

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser