Gene Card
Gene overview
cDNA / CDS / Protein Sequences
3269 bp · TkA03G116510|TK1151|cDNA
TTATTTAACAATCAAATATCCCTCTTAATATCACTACTAATTACTCTTGTTAGAACAATTATGAATTCATATTATTATCTGTTGACAACGACCCACTATGTTTATACAAATTGGTAAAGAAAAATTAGAGCACGGCATATCCACCGCCATTTCTCATTCTGCCGGCTCATTGAACACATGATACAAAACTAAGCATTTTAAGAACAATCAATGAGTGGCGTAGACTTCAGCGGACTCCAATTTCTTTATCTTTTTGTTTA...
2712 bp · TkA03G116510|TK1151|CDS
ATGACTCCACCGGAAACAATGGCGATGATAACAGTTATACTGTTAATACTGCTCTCGATTGATCGGAAAACCCTTGCTGCTGACGATAAACAACCGGGTACAATTGGCCACGGGTACACTCTCCGATCTATTGCCTTAGGTTCGTCGGGGAAATCATTGGTCGCTGATCTTCAACTCAATAAGAAGTCTTCCTTGTTTGGACCTGACATCGATGAACTTCGGCTCTTCGCAAGCTTTGAAACAGCTGATTCTTTGAGGGT...
Protein
Download Protein FASTA903 aa · TkA03G116510|TK1151|PROTEIN
MTPPETMAMITVILLILLSIDRKTLAADDKQPGTIGHGYTLRSIALGSSGKSLVADLQLNKKSSLFGPDIDELRLFASFETADSLRVRITDAKHKRWEIPTHILPRQSLTFDFPPKSQQQIPTELLLSDPTSDLILNLHNTTTGTATQFGFTITRRSTGDILFDTSGTVLVFKDQYLELTSSLPANRSSIYGLGEHTKRSFKLTHNQTLTLWNADIGSANLDLNLYGSHPYYMDVRSTDSDGKVVAGTAHGVLLLNSNGM...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G116510 |
|---|---|
| TK1151 ID | TkA03G116510 |
| OH-1004 ID | LXL04_007140 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 98.300 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G116510 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:29782953-29797452 (-) | ||||||||||||
| Description | Similar to Alpha-glucosidase | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0000272 polysaccharide catabolic process Biological Process GO:0005975 carbohydrate metabolic process Biological Process GO:0010411 xyloglucan metabolic process Biological Process GO:0045493 xylan catabolic process Biological Process GO:0046686 response to cadmium ion Biological Process GO:0071555 cell wall organization Biological Process GO:0005576 extracellular region Cellular Component GO:0005739 mitochondrion Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0009506 plasmodesma Cellular Component GO:0048046 apoplast Cellular Component GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Molecular Function | ||||||||||||
| KEGG gene cross-reference | ath:AT1G68560 dosa:Os06g0675700 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF13802Gal_mutarotas_278-238 aaPF01055Glyco_hydro_31_2nd303-651 aaPF21365Glyco_hydro_31_3rd334-372 aaPF21365Glyco_hydro_31_3rd448-461 aaPF21365Glyco_hydro_31_3rd659-748 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA03G116510 | PF13802 | Gal_mutarotas_2 | 78 | 238 | 1.8e-10 | 42.1 |
| TkA03G116510 | PF01055 | Glyco_hydro_31_2nd | 303 | 651 | 4.8e-124 | 414.6 |
| TkA03G116510 | PF21365 | Glyco_hydro_31_3rd | 334 | 372 | 6.5e-24 | 84.9 |
| TkA03G116510 | PF21365 | Glyco_hydro_31_3rd | 448 | 461 | 6.5e-24 | 84.9 |
| TkA03G116510 | PF21365 | Glyco_hydro_31_3rd | 659 | 748 | 6.5e-24 | 84.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.