Gene Card
Gene overview
cDNA / CDS / Protein Sequences
522 bp · TkA03G113220|TK1151|cDNA
AAGGCCATAAGAGAAGATTGCCCTCCCGGTAAGGAAGAGGGGAAAAAGGCGCTGTCATCTATCTCGACCAGTTTCCCGAGGCGTTGGAAATCCAGACCGGCTCAGAGAATCACTGGTGCTATTTATCCCTTCGTTTCGACAACAAAGAAGTCATCTTTGACGATTTCCCATTCCTTCCCTGGCGAGCCGCCTCTCTTCGCCATTCGATGCCTGTATGATATGGTGGTGGATCCTTCTCTTTGTTCGTGTGTTATACTGGT...
522 bp · TkA03G113220|TK1151|CDS
AAGGCCATAAGAGAAGATTGCCCTCCCGGTAAGGAAGAGGGGAAAAAGGCGCTGTCATCTATCTCGACCAGTTTCCCGAGGCGTTGGAAATCCAGACCGGCTCAGAGAATCACTGGTGCTATTTATCCCTTCGTTTCGACAACAAAGAAGTCATCTTTGACGATTTCCCATTCCTTCCCTGGCGAGCCGCCTCTCTTCGCCATTCGATGCCTGTATGATATGGTGGTGGATCCTTCTCTTTGTTCGTGTGTTATACTGGT...
Protein
Download Protein FASTA173 aa · TkA03G113220|TK1151|PROTEIN
KAIREDCPPGKEEGKKALSSISTSFPRRWKSRPAQRITGAIYPFVSTTKKSSLTISHSFPGEPPLFAIRCLYDMVVDPSLCSCVILVAFGMFLILWVCCLLQVPLMLSFFTLGRVGGGVFFRVLGSRCPSSAAWCVFWGVFLFWGVLLWLLFRVLFVDVVLFRWGWGFLVFGC
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G113220 |
|---|---|
| TK1151 ID | TkA03G113220 |
| OH-1004 ID | LXL04_007088 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 68.600 |
| Protein coverage (%) | TK1151 85.549 / OH-1004 11.237Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G113220 |
|---|---|
| Location | Chr03:28972232-28972753 (+) |
| Description | Similar to At4g18375: KH domain-containing protein At4g18375 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006396 RNA processing Biological Process GO:0006397 mRNA processing Biological Process GO:0006970 response to osmotic stress Biological Process GO:0008380 RNA splicing Biological Process GO:0009867 jasmonic acid mediated signaling pathway Biological Process GO:0010286 heat acclimation Biological Process GO:0010468 regulation of gene expression Biological Process GO:0031053 primary miRNA processing Biological Process GO:1900150 regulation of defense response to fungus Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0010445 nuclear dicing body Cellular Component |
| KEGG gene cross-reference | ath:AT4G18375 ath:AT5G53060 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.