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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G105100
Reference: TK1151 Chr: Chr03 Coordinates: 26879649-26882231 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1164 bp · TkA03G105100|TK1151|cDNA

ATGGCGTATCAATCCAGCGAAAAAGATATGACAGATGATTTCGATATGCAAAGGATCGGGAACTTTCTCAGTTGTGCTTCGAGAGGTGATAGGGTTGGGCTTAATATGATGTTGAGGGACGGCATTTCTCCTAATGTGCAGGATTACGATAACAGGACTGCTCTTCATCTAGCTGCTAGTGAAGGTCATGCTTCGATTGTAGAGCTTCTTTTGCACTACAAGGCCGATGTTAATCTCGATGATAGATGGCATAGAACTCC...

CDS

Download CDS FASTA

1164 bp · TkA03G105100|TK1151|CDS

ATGGCGTATCAATCCAGCGAAAAAGATATGACAGATGATTTCGATATGCAAAGGATCGGGAACTTTCTCAGTTGTGCTTCGAGAGGTGATAGGGTTGGGCTTAATATGATGTTGAGGGACGGCATTTCTCCTAATGTGCAGGATTACGATAACAGGACTGCTCTTCATCTAGCTGCTAGTGAAGGTCATGCTTCGATTGTAGAGCTTCTTTTGCACTACAAGGCCGATGTTAATCTCGATGATAGATGGCATAGAACTCC...

Protein

Download Protein FASTA

387 aa · TkA03G105100|TK1151|PROTEIN

MAYQSSEKDMTDDFDMQRIGNFLSCASRGDRVGLNMMLRDGISPNVQDYDNRTALHLAASEGHASIVELLLHYKADVNLDDRWHRTPLTDARLYGHRDICRILEVNGGKDSIMNSPMTVRHEEDAKEVNIEISEINSEHSEKIEQGVFGNSEKVKWRGTWVVKTKIKRQINFPVKMVLSANDNTRLRELRHPNILQFLGSIMHDGQMILITEHLSRGSLDDILKKRIGLDLQLALRFALDIARGMNYLHHHTPCPIIHNH...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA03G105100
TK1151 IDTkA03G105100
OH-1004 IDLXL04_007034
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.700
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G105100
LocationChr03:26879649-26882231 (-)
DescriptionSimilar to ILK1: Integrin-linked protein kinase 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g18950 Serine/threonine protein kinase that phosphorylates proteins on serine and threonine residues (By similarity). No verified direct reference in this release
At1g14000 Serine/threonine protein kinase which may function as an adapter protein for BRL2. No verified direct reference in this release
At2g43850 Functions as a link between plant defense pathways, stress responses and potassium homeostasis. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_007034 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0001666 response to hypoxia Biological Process
GO:0006970 response to osmotic stress Biological Process
GO:0007165 signal transduction Biological Process
GO:0007229 integrin-mediated signaling pathway Biological Process
GO:0009637 response to blue light Biological Process
GO:0009686 gibberellin biosynthetic process Biological Process
GO:0009723 response to ethylene Biological Process
GO:0009733 response to auxin Biological Process
GO:0009734 auxin-activated signaling pathway Biological Process
GO:0009742 brassinosteroid mediated signaling pathway Biological Process
GO:0009744 response to sucrose Biological Process
GO:0009750 response to fructose Biological Process
KEGG gene cross-reference
ath:AT1G14000
ath:AT2G43850
ath:AT4G18950
ath:AT5G03730
ddi:DDB_G0271682
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.633
Rank 1 · TkA03G105100 · TK1151
Nucleus0.295
Rank 2 · TkA03G105100 · TK1151
Cell membrane0.189
Rank 3 · TkA03G105100 · TK1151
Mitochondrion0.070
Rank 4 · TkA03G105100 · TK1151
Golgi apparatus0.060
Rank 5 · TkA03G105100 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13606Ank_323-45 aa
PF24521Ank_KRIT123-73 aa
PF12796Ank_225-103 aa
PF00023Ank26-48 aa
PF13857Ank_538-88 aa
PF13637Ank_440-71 aa
PF00023Ank50-81 aa
PF13606Ank_350-78 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G105100PF13606Ank_323451.5e-0628.7
TkA03G105100PF24521Ank_KRIT123730.02614.9
TkA03G105100PF12796Ank_2251031.5e-1248.6
TkA03G105100PF00023Ank26489.4e-1348.4
TkA03G105100PF13857Ank_538881.1e-0835.9
TkA03G105100PF13637Ank_440713.2e-0731.2
TkA03G105100PF00023Ank50819.4e-1348.4
TkA03G105100PF13606Ank_350781.5e-0628.7
TkA03G105100PF13637Ank_4661033.2e-0731.2
TkA03G105100PF00023Ank851039.4e-1348.4
TkA03G105100PF13606Ank_3851041.5e-0628.7
TkA03G105100PF24521Ank_KRIT1871110.02614.9
TkA03G105100PF29220DUF85151141660.1612.3
TkA03G105100PF07714PK_Tyr_Ser-Thr1403732.8e-2383.3
TkA03G105100PF00069Pkinase1403564e-1866.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q93Z30Arabidopsis thalianasp|Q93Z30|BHP_ARATH Serine/threonine-protein kinase 1233.500%Swiss-ProtMedium
Q9XI87Arabidopsis thalianasp|Q9XI87|VIK_ARATH Serine/threonine-protein kinase VIK32.600%Swiss-ProtMedium
F4IS56Arabidopsis thalianasp|F4IS56|ILK1_ARATH Integrin-linked protein kinase 129.300%Swiss-ProtLow

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