Gene Card
Gene overview
cDNA / CDS / Protein Sequences
3147 bp · TkA02G567060|TK1151|cDNA
ATTTTATCCAAGATATCACCACAAACACATGACAACTTTTTTCCGTTAAAATATTCCCAGACCACCATCTTTGAAGGCTTGAAGCCATCATTCAAGGAACTTTCTCCCCAATTCCCTTGCAATACATCCCGATCTTTTATGGCTAATGATACAAAAATAGCTCATCGATCTCATACTTGAAACTTTTTTGTTACAACAACAGTTCGTACTGTTATTGATCTTTAAACCTCCTTTTTTTTTCTTCAAAAAAGTCAACCTGT...
2448 bp · TkA02G567060|TK1151|CDS
ATGTATAGAAGGAAGATGAAAAAAGCTAGTATTGATATGAGTGAAATAACGGAGTTCTTGAATCAATTATATGTGGAAAAACCTCTTTTTCCATTGGTGATTCCTTTGTTATTGGTTTTATGGAGCATTGAGAAATGGGTTTTCAACCTCTCGAATTGGGTTCCTCTTGCTGTTGCCGTCTGGGCAACTATTCAGTATGGAAGTTATCGACAACGAATTGTTGTGCAAGACTTGAACAAAAAGTGGAAGCAACTCATTTT...
Protein
Download Protein FASTA815 aa · TkA02G567060|TK1151|PROTEIN
MYRRKMKKASIDMSEITEFLNQLYVEKPLFPLVIPLLLVLWSIEKWVFNLSNWVPLAVAVWATIQYGSYRQRIVVQDLNKKWKQLILQTSPTTPLEHCEWLNKLLIEVWPNFISPKLSLKFSSIVEKRLKHRKTKLIERIELQEFSLGSLPPILGMHGAQWSTAGDQRFIRMGFDWDTTDISIMLFAKLAKPMGTARIVVNNIHIKGDLLISPILEGRAVLYSFVSTPEVRIGVAFGSGGSQSLPATELPGVSSWLVKIC...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G567060 |
|---|---|
| TK1151 ID | TkA02G567060 |
| OH-1004 ID | LXL04_012402 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.900 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G567060 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:146522324-146527244 (+) | |||||||||
| Description | Similar to Mctp1: Multiple C2 and transmembrane domain-containing protein 1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006869 lipid transport Biological Process GO:0030336 negative regulation of cell migration Biological Process GO:0045806 negative regulation of endocytosis Biological Process GO:1902883 negative regulation of response to oxidative stress Biological Process GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009506 plasmodesma Cellular Component GO:0012505 endomembrane system Cellular Component GO:0016020 membrane Cellular Component GO:0033011 perinuclear theca Cellular Component GO:0055037 recycling endosome Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G05500 rno:309928 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF25669SMP_MUG190-like96-151 aaPF25669SMP_MUG190-like218-275 aaPF00168C2291-388 aaPF00168C2473-569 aaPF00168C2599-696 aaPF08702Fib_alpha707-794 aaPF26012HH_RND_rel708-767 aaPF14130Cap4_nuclease716-795 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G567060 | PF25669 | SMP_MUG190-like | 96 | 151 | 1.2e-05 | 25.7 |
| TkA02G567060 | PF25669 | SMP_MUG190-like | 218 | 275 | 1.2e-05 | 25.7 |
| TkA02G567060 | PF00168 | C2 | 291 | 388 | 3.4e-41 | 140.4 |
| TkA02G567060 | PF00168 | C2 | 473 | 569 | 3.4e-41 | 140.4 |
| TkA02G567060 | PF00168 | C2 | 599 | 696 | 3.4e-41 | 140.4 |
| TkA02G567060 | PF08702 | Fib_alpha | 707 | 794 | 4.3 | 8.2 |
| TkA02G567060 | PF26012 | HH_RND_rel | 708 | 767 | 0.073 | 14.0 |
| TkA02G567060 | PF14130 | Cap4_nuclease | 716 | 795 | 0.25 | 12.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.