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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G503880
Reference: TK1151 Chr: Chr02 Coordinates: 129234400-129236722 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2226 bp · TkA02G503880|TK1151|cDNA

TACGTGAATACTTATATACGTGAATACAAGCGTCTTATGGTGAGCGTGAAACGGTTTAAGCAGTTCGGAAGTGAAGGTGTTTGGTCCGCTGAACGCATCCTGTCTTCCTCGTAGTTCCCCCACTTTACCACTTTATTACCACTCTATTGCTCCTCTCTTTTGTCTCTTACCTCTTTCCATCCATTATTATATTCTCAATCTTTTCTTACATCATCCTAAAACAAACATATTCATTAATTACCATCACCCATAAATGTTAA...

CDS

Download CDS FASTA

1554 bp · TkA02G503880|TK1151|CDS

ATGAGCAACGACGCTAAAAACAGCTCTAATAATGGCTCCGCCAAGTCACCCGATCTGAGTTTTCAAGATCTTAGCATTAATTCCAGTCCTAGGACAGATTTGAGCATTAGCACCGTTAGCGGCTCCAATAATTGCTCCACTTGTAAAGCTAGTGATAGCGGCGTCGAGGAGAAAGACGTCGTACATTTGAATGAAGAATGTGAGGGGAGTGAGAAGACTAGTTTGAGTTCTTCAAGCTTTTGCTACAGCGTAGATCCGAG...

Protein

Download Protein FASTA

517 aa · TkA02G503880|TK1151|PROTEIN

MSNDAKNSSNNGSAKSPDLSFQDLSINSSPRTDLSISTVSGSNNCSTCKASDSGVEEKDVVHLNEECEGSEKTSLSSSSFCYSVDPSEAKSKTFCPSKPHKANDIRWDAIQTVKGRDGELSLSHFRLLKKLGFGDIGSVYLAELRGMGCLFAVKVMDKGMLVGRKKLVRAQTEREILGLLDHPFLPTLYSHFETEKLSCLLMEFCSGGDLHILRQRQPGKHFSEQAARFYASEVLLSLEYLHMMGVVYRDLKPENVLVRE...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G503880
TK1151 IDTkA02G503880
OH-1004 IDLXL04_013341
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G503880
LocationChr02:129234400-129236722 (-)
DescriptionSimilar to D6PKL2: Serine/threonine-protein kinase D6PKL2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g47750 Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation.
D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis.2013 · DOI: 10.1105/tpc.113.111484
At5g55910 Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation.
The polarly localized D6 PROTEIN KINASE is required for efficient auxin transport in Arabidopsis thaliana.2009 · DOI: 10.1242/dev.028365
D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis.2013 · DOI: 10.1105/tpc.113.111484
Arabidopsis D6PK is a lipid domain-dependent mediator of root epidermal planar polarity.2015 · DOI: 10.1038/nplants.2015.162
At4g26610 Protein kinase that regulates the auxin transport activity of PIN auxin efflux facilitators by direct phosphorylation.
D6PK AGCVIII kinases are required for auxin transport and phototropic hypocotyl bending in Arabidopsis.2013 · DOI: 10.1105/tpc.113.111484

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2YBX5 May play a role in the regulation of metabolism and signal transduction processes. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013341 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0009630 gravitropism Biological Process
GO:0009638 phototropism Biological Process
GO:0009734 auxin-activated signaling pathway Biological Process
GO:0010540 basipetal auxin transport Biological Process
GO:0048766 root hair initiation Biological Process
GO:2000114 regulation of establishment of cell polarity Biological Process
GO:0005634 nucleus Cellular Component
GO:0005730 nucleolus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009925 basal plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT5G47750
ath:AT5G55910
dosa:Os06g0291600
osa:4340792
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.555
Rank 1 · TkA02G503880 · TK1151
Nucleus0.435
Rank 2 · TkA02G503880 · TK1151
Cell membrane0.112
Rank 3 · TkA02G503880 · TK1151
Mitochondrion0.051
Rank 4 · TkA02G503880 · TK1151
Golgi apparatus0.045
Rank 5 · TkA02G503880 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00069Pkinase126-274 aa
PF07714PK_Tyr_Ser-Thr126-275 aa
PF03109ABC1131-159 aa
PF03109ABC1186-271 aa
PF01163RIO1198-269 aa
PF14531Kinase-like225-270 aa
PF00069Pkinase356-459 aa
PF07714PK_Tyr_Ser-Thr363-446 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G503880PF00069Pkinase1262741.8e-60205.3
TkA02G503880PF07714PK_Tyr_Ser-Thr1262756.6e-2795.2
TkA02G503880PF03109ABC11311590.007416.2
TkA02G503880PF03109ABC11862710.007416.2
TkA02G503880PF01163RIO11982690.2211.8
TkA02G503880PF14531Kinase-like2252700.1611.9
TkA02G503880PF00069Pkinase3564591.8e-60205.3
TkA02G503880PF07714PK_Tyr_Ser-Thr3634466.6e-2795.2
TkA02G503880PF14531Kinase-like3794020.1611.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q39183Arabidopsis thalianasp|Q39183|D6KL2_ARATH Serine/threonine-protein kinase D6PKL265.600%Swiss-ProtHigh
Q9FG74Arabidopsis thalianasp|Q9FG74|D6PK_ARATH Serine/threonine-protein kinase D6PK59.500%Swiss-ProtHigh
Q9SUA3Arabidopsis thalianasp|Q9SUA3|D6KL1_ARATH Serine/threonine-protein kinase D6PKL158.000%Swiss-ProtHigh
A2YBX5Oryza sativa subsp. indicasp|A2YBX5|G11A_ORYSI Protein kinase G11A59.600%Swiss-ProtHigh

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