Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1760 bp · TkA02G401220|TK1151|cDNA
TATGACTTATGACTTTGTAAAAGGTTTGACGCCGTGAAGTTGCATAGACCAAGTAAAACTTTACTTTCTGTCGAATCTCTGCAAAACAATGACCTTCTTGTTGGCATCTTCATCCTCCTACCGCGTCAACGCTCTCATCCATACTACAATTCTTTCTCCTCGATCACATGAACAAATTAACTTATATTTGATCAAGTTTCAATCGGAACAGCAACAACACTTGGCCACGCAATCCAGTCGTTCCTTTGATGGCCAACCCA...
1083 bp · TkA02G401220|TK1151|CDS
ATGGCCAACCCACCGGTAAAAAAGATAGTAGTTATTGGTGGCGGAGTTGCCGGCTCCTACATTGCTAAATCGCTCCAGTTTCATGGCAATCTAACCCTAATTGATCCGAAGGAGTACTTTGAGATTCCATGGGCAAGCTTGAGAGGAATGGTGGAGCCAAGTTTTGCAGAGAGATCCCTAATCCAGCATAAAGACTACCTGACAGCTTCCCGTCTTATTGTTTCCAATGCTATCAGTATAACGGATTCTGAAATCCTCAT...
Protein
Download Protein FASTA360 aa · TkA02G401220|TK1151|PROTEIN
MANPPVKKIVVIGGGVAGSYIAKSLQFHGNLTLIDPKEYFEIPWASLRGMVEPSFAERSLIQHKDYLTASRLIVSNAISITDSEILILEGRTIPYDYLVIATGHGDQVPKTRSERLKQYQSENEKIKASQSILIVGGGPTGVELAGEIAVDFPEKKVTLVHKGYRLLEFLGPKASKKTLEWLKSRRVEVKLDQTVNLEDVSDGSNRYTTSAGEAIRADCHFICTGKPLAYSWLKGTILRDRLDKSGRLIVDENLRVKGRN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G401220 |
|---|---|
| TK1151 ID | TkA02G401220 |
| OH-1004 ID | LXL04_014735 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G401220 |
|---|---|
| Location | Chr02:101862988-101865054 (-) |
| Description | Similar to aifB: Apoptosis-inducing factor homolog B |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006743 ubiquinone metabolic process Biological Process GO:0042373 vitamin K metabolic process Biological Process GO:0110076 negative regulation of ferroptosis Biological Process GO:1900407 regulation of cellular response to oxidative stress Biological Process GO:1990748 cellular detoxification Biological Process GO:0005615 extracellular space Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005741 mitochondrial outer membrane Cellular Component GO:0005811 lipid droplet Cellular Component GO:0005829 cytosol Cellular Component |
| KEGG gene cross-reference | ddi:DDB_G0285003 ddi:DDB_G0285005 gga:423720 hsa:84883 tgu:100190613 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07992Pyr_redox_27-283 aaPF13434Lys_Orn_oxgnase7-26 aaPF06690HcgC7-39 aaPF13241NAD_binding_77-49 aaPF00070Pyr_redox8-38 aaPF03486HI0933_like8-34 aaPF01266DAO8-37 aaPF01134GIDA8-25 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G401220 | PF07992 | Pyr_redox_2 | 7 | 283 | 5.8e-33 | 115.3 |
| TkA02G401220 | PF13434 | Lys_Orn_oxgnase | 7 | 26 | 9.6e-05 | 22.4 |
| TkA02G401220 | PF06690 | HcgC | 7 | 39 | 0.0017 | 18.7 |
| TkA02G401220 | PF13241 | NAD_binding_7 | 7 | 49 | 0.039 | 15.2 |
| TkA02G401220 | PF00070 | Pyr_redox | 8 | 38 | 2.5e-11 | 44.7 |
| TkA02G401220 | PF03486 | HI0933_like | 8 | 34 | 4.7e-05 | 23.7 |
| TkA02G401220 | PF01266 | DAO | 8 | 37 | 0.00071 | 19.9 |
| TkA02G401220 | PF01134 | GIDA | 8 | 25 | 0.062 | 13.1 |
| TkA02G401220 | PF04820 | Trp_halogenase | 8 | 33 | 0.13 | 11.8 |
| TkA02G401220 | PF01946 | Thi4 | 8 | 26 | 0.18 | 11.7 |
| TkA02G401220 | PF05834 | Lycopene_cycl | 9 | 38 | 0.00091 | 19.1 |
| TkA02G401220 | PF02254 | TrkA_N | 9 | 38 | 0.009 | 17.0 |
| TkA02G401220 | PF01494 | FAD_binding_3 | 9 | 29 | 0.031 | 14.2 |
| TkA02G401220 | PF00890 | FAD_binding_2 | 9 | 34 | 0.13 | 12.2 |
| TkA02G401220 | PF13454 | NAD_binding_9 | 10 | 44 | 1.4e-06 | 29.1 |
| TkA02G401220 | PF13738 | Pyr_redox_3 | 10 | 30 | 2e-06 | 28.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.