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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G383470
Reference: TK1151 Chr: Chr02 Coordinates: 97460567-97468265 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1488 bp · TkA02G383470|TK1151|cDNA

ATGAGCCAATACTGTACAAAGATATATATATCGAAGTGTCGTGGTTTGTCCAATATGATTCCATATTATGCCCTAGGACAAATGCAAAAGCTTCAAAGGCTGGAAATAGACTCTTGCAACGATATGAAGGAGGTGTTTGAAACTCAAGGGATCAACAATGACAACAATATTGATGATGTAAATGGTGGTACACCGGCAATTCGAAGACCAAATGATGTTATTTTACTTAAACTTTCCAACCTAAAGTTTTTGAGAATTTC...

CDS

Download CDS FASTA

1488 bp · TkA02G383470|TK1151|CDS

ATGAGCCAATACTGTACAAAGATATATATATCGAAGTGTCGTGGTTTGTCCAATATGATTCCATATTATGCCCTAGGACAAATGCAAAAGCTTCAAAGGCTGGAAATAGACTCTTGCAACGATATGAAGGAGGTGTTTGAAACTCAAGGGATCAACAATGACAACAATATTGATGATGTAAATGGTGGTACACCGGCAATTCGAAGACCAAATGATGTTATTTTACTTAAACTTTCCAACCTAAAGTTTTTGAGAATTTC...

Protein

Download Protein FASTA

495 aa · TkA02G383470|TK1151|PROTEIN

MSQYCTKIYISKCRGLSNMIPYYALGQMQKLQRLEIDSCNDMKEVFETQGINNDNNIDDVNGGTPAIRRPNDVILLKLSNLKFLRISSCHSLEYIFTFSALESLKQLEELLIDGCRRMKVIVKEENDGEQPTLSSSKVMVFPCLKSIKLVDLVDLVSFFLGMNEFRWPLLDKVTISGCPHMTSFTHGESKTPKLKYIHTRLGKHILEPAGLNFCPPILQRVDHTSLFPGPAKGMPWSFHNLIELIYVRYNHVHEKIIPCS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G383470
TK1151 IDTkA02G383470
OH-1004 IDLXL04_015200
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)53.400
Protein coverage (%)TK1151 96.364 / OH-1004 27.051
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G383470
LocationChr02:97460567-97468265 (-)
DescriptionSimilar to RPS2: Disease resistance protein RPS2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015200 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002220 innate immune response activating cell surface receptor signaling pathway Biological Process
GO:0006952 defense response Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0016045 detection of bacterium Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0098542 defense response to other organism Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0043531 ADP binding Molecular Function
KEGG gene cross-reference
ath:AT1G61180
ath:AT1G61190
ath:AT4G26090
ath:AT4G27190
ath:AT4G27220
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.503
Rank 1 · TkA02G383470 · TK1151
Cytoplasm0.424
Rank 2 · TkA02G383470 · TK1151
Cell membrane0.160
Rank 3 · TkA02G383470 · TK1151
Endoplasmic reticulum0.061
Rank 4 · TkA02G383470 · TK1151
Extracellular0.049
Rank 5 · TkA02G383470 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF25019LRR_R13L1-DRL216-39 aa
PF23247LRR_RPS27-57 aa
PF29594LRR_SKP210-117 aa
PF23952LRR_EndoS25-49 aa
PF25019LRR_R13L1-DRL2175-108 aa
PF23952LRR_EndoS76-121 aa
PF23247LRR_RPS278-183 aa
PF04399Glutaredoxin2_C116-151 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G383470PF25019LRR_R13L1-DRL216391.1e-0526.1
TkA02G383470PF23247LRR_RPS27576.9e-47160.1
TkA02G383470PF29594LRR_SKP2101170.859.5
TkA02G383470PF23952LRR_EndoS25490.0006420.6
TkA02G383470PF25019LRR_R13L1-DRL21751081.1e-0526.1
TkA02G383470PF23952LRR_EndoS761210.0006420.6
TkA02G383470PF23247LRR_RPS2781836.9e-47160.1
TkA02G383470PF04399Glutaredoxin2_C1161510.1312.8
TkA02G383470PF25019LRR_R13L1-DRL211391581.1e-0526.1
TkA02G383470PF25019LRR_R13L1-DRL211691971.1e-0526.1
TkA02G383470PF23247LRR_RPS22373716.9e-47160.1
TkA02G383470PF29594LRR_SKP22622870.859.5
TkA02G383470PF25019LRR_R13L1-DRL212652811.1e-0526.1
TkA02G383470PF23952LRR_EndoS2673190.0006420.6
TkA02G383470PF25019LRR_R13L1-DRL213073701.1e-0526.1
TkA02G383470PF29594LRR_SKP23303730.859.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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