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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G127760
Reference: TK1151 Chr: Chr02 Coordinates: 33161659-33163565 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

927 bp · TkA02G127760|TK1151|cDNA

ATGCAAACAGATACTTGGGGATTTCTTCAAGAAGTATACAAGATTCGTGGGTTATCAACCGATTTGGATCCCCGCTCTTTGATATTGGAATTGGTTCTTAATACCCGCATAAATCCCCGTTCTTTGATGTTGGAATTGTTTCAATTCCGATGCTTCTGTTTCCGGGGACTCGGCTACTACGACGGTGCAGAAGTCCAGCGGATGGTTTTGTCAGAACAATTAATCTATGCGTCTCTGGCGGCCGAGGATTATGCTCGTAG...

CDS

Download CDS FASTA

927 bp · TkA02G127760|TK1151|CDS

ATGCAAACAGATACTTGGGGATTTCTTCAAGAAGTATACAAGATTCGTGGGTTATCAACCGATTTGGATCCCCGCTCTTTGATATTGGAATTGGTTCTTAATACCCGCATAAATCCCCGTTCTTTGATGTTGGAATTGTTTCAATTCCGATGCTTCTGTTTCCGGGGACTCGGCTACTACGACGGTGCAGAAGTCCAGCGGATGGTTTTGTCAGAACAATTAATCTATGCGTCTCTGGCGGCCGAGGATTATGCTCGTAG...

Protein

Download Protein FASTA

308 aa · TkA02G127760|TK1151|PROTEIN

MQTDTWGFLQEVYKIRGLSTDLDPRSLILELVLNTRINPRSLMLELFQFRCFCFRGLGYYDGAEVQRMVLSEQLIYASLAAEDYARRFESGDMVEGITKDLAADEQGLLNANVMCLLCFSGENEEIERAKKMLSCKNCNKKYHRTCVKSVSLEFLDLPFMLYMYAEGLVIQISLCIAKGVMVLIIVTVSSLHTSIGPYLCPKHTKCHRCASIVPGNERIQLETSRLYKELIEFHCTLDIFLNSLFSFNEVVKSSVNEVGT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G127760
TK1151 IDTkA02G127760
OH-1004 IDLXL04_005477
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)79.100
Protein coverage (%)TK1151 95.779 / OH-1004 71.495
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G127760
LocationChr02:33161659-33163565 (-)
DescriptionSimilar to Kmt2d: Histone-lysine N-methyltransferase 2D
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_005477 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006351 DNA-templated transcription Biological Process
GO:0006355 regulation of DNA-templated transcription Biological Process
GO:0008284 positive regulation of cell population proliferation Biological Process
GO:0010468 regulation of gene expression Biological Process
GO:0031507 heterochromatin formation Biological Process
GO:0032259 methylation Biological Process
GO:0033148 positive regulation of intracellular estrogen receptor signaling pathway Biological Process
GO:0043627 response to estrogen Biological Process
GO:0045944 positive regulation of transcription by RNA polymerase II Biological Process
GO:1904837 beta-catenin-TCF complex assembly Biological Process
GO:0005634 nucleus Cellular Component
GO:0005654 nucleoplasm Cellular Component
KEGG gene cross-reference
hsa:58508
hsa:8085
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.646
Rank 1 · TkA02G127760 · TK1151
Cytoplasm0.322
Rank 2 · TkA02G127760 · TK1151
Mitochondrion0.060
Rank 3 · TkA02G127760 · TK1151
Cell membrane0.060
Rank 4 · TkA02G127760 · TK1151
Endoplasmic reticulum0.047
Rank 5 · TkA02G127760 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16866PHD_4112-149 aa
PF14446Prok-RING_1113-148 aa
PF22908PHD_NSD114-151 aa
PF00628PHD115-148 aa
PF28998SAS4_C120-185 aa
PF30811PHD_UBR7-like122-149 aa
PF27108PHD_Pygo123-148 aa
PF00130C1_1126-153 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G127760PF16866PHD_41121490.0004920.7
TkA02G127760PF14446Prok-RING_11131480.01316.4
TkA02G127760PF22908PHD_NSD1141510.005317.7
TkA02G127760PF00628PHD1151480.001419.4
TkA02G127760PF28998SAS4_C1201850.1512.1
TkA02G127760PF30811PHD_UBR7-like1221490.05614.1
TkA02G127760PF27108PHD_Pygo1231480.02415.4
TkA02G127760PF00130C1_11261530.002518.3
TkA02G127760PF23004PHDvar_NSD1271490.0514.3
TkA02G127760PF23570PHD_P3001341470.1312.9
TkA02G127760PF22908PHD_NSD1982030.005317.7
TkA02G127760PF23004PHDvar_NSD1992040.0514.3
TkA02G127760PF00130C1_12022150.002518.3
TkA02G127760PF00628PHD2032090.001419.4
TkA02G127760PF14446Prok-RING_12032110.01316.4
TkA02G127760PF23004PHDvar_NSD2032080.0514.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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