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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G106900
Reference: TK1151 Chr: Chr02 Coordinates: 27998887-28002815 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3092 bp · TkA02G106900|TK1151|cDNA

AGAGGGATGTCACATCAGGAAGGGTATGAAATGTAAAGGGCATCAGGGGGATATGTATAGATTTGGCCTTAAATTAAAAACAACTCATTTCCATCAGATTTATCAAATCAAAAAGAAATATTACCTTAATTTGTTTAAGATGCGTTGACCTAGAAATCCAATTATCAACTTGACAATGTCAACCTCTGTTTTTTGGATCTTCTCCAATATCTTCGTTTCATCAAATCAATCCATCTCATCTTCCTGTCCAATTTTTATGC...

CDS

Download CDS FASTA

2526 bp · TkA02G106900|TK1151|CDS

ATGGATTTCATTCTTTCCGAATCCATCACCCAACTATGTACACTGGTAATATATGTAGCTAAAACCACCGCCAATTTCAAGCCAGAACTGAAGTTACTCGGTGACACTTTAGAGAGAATAACACCCATCATTCTCGATACAGTCACTATGAATCAGAAACTAGATCGTTCAGTGAAAGAGTGCAAGATGTTCAAAAAGGAAATCGAAGAAGCGGAAAAACTTGTCACCAAATGCTCGAAAGTGAAGAGGAATATCATCAA...

Protein

Download Protein FASTA

841 aa · TkA02G106900|TK1151|PROTEIN

MDFILSESITQLCTLVIYVAKTTANFKPELKLLGDTLERITPIILDTVTMNQKLDRSVKECKMFKKEIEEAEKLVTKCSKVKRNIIKKFTYSLKLKDFNGKLLRFFQIEVQAIQTRDITETLLGVNDIKLKIDTLSVDLKDRQLRTSENSNDSGSMSLPTRADQSGSEKMKRGDYGWRVPALPIGIVAFDEPLTKLKAEVVAGIDIGDDGKSMDRDDRRVLVVAAAGGCGKTTLVKMLCHDPEILEKFGENIFFVTVSET...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA02G106900
TK1151 IDTkA02G106900
OH-1004 IDLXL04_016759
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)77.000
Protein coverage (%)TK1151 99.881 / OH-1004 99.413
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G106900
LocationChr02:27998887-28002815 (+)
DescriptionSimilar to At5g66900: Probable disease resistance protein At5g66900
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g66900 Probable disease resistance protein. No verified direct reference in this release
At5g66910 Probable disease resistance protein. No verified direct reference in this release
At4g33300 Probable disease resistance protein. No verified direct reference in this release
At5g47280 Potential disease resistance protein. No verified direct reference in this release
At1g33560 Disease resistance (R) protein that mediates resistance against Hyaloperonospora parasitica in a salicylic acid-dependent manner.
Targeted activation tagging of the Arabidopsis NBS-LRR gene, ADR1, conveys resistance to virulent pathogens.2003 · DOI: 10.1094/mpmi.2003.16.8.669

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_016759 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0007166 cell surface receptor signaling pathway Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0005634 nucleus Cellular Component
GO:0005829 cytosol Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0012505 endomembrane system Cellular Component
GO:0048046 apoplast Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0043531 ADP binding Molecular Function
KEGG gene cross-reference
ath:AT4G33300
ath:AT5G04720
ath:AT5G47280
ath:AT5G66900
ath:AT5G66910
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.600
Rank 1 · TkA02G106900 · TK1151
Cytoplasm0.191
Rank 2 · TkA02G106900 · TK1151
Endoplasmic reticulum0.147
Rank 3 · TkA02G106900 · TK1151
Nucleus0.125
Rank 4 · TkA02G106900 · TK1151
Lysosome / Vacuole0.059
Rank 5 · TkA02G106900 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF05659RPW89-133 aa
PF25055DUF779210-99 aa
PF22794jr-ZPR164-100 aa
PF03215Rad17211-263 aa
PF00931NB-ARC213-364 aa
PF25199nSTAND_NTPase5214-260 aa
PF24883NPHP3_N215-242 aa
PF13401AAA_22216-277 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G106900PF05659RPW891331.1e-2797.0
TkA02G106900PF25055DUF779210990.2512.2
TkA02G106900PF22794jr-ZPR1641000.04114.5
TkA02G106900PF03215Rad172112630.009516.6
TkA02G106900PF00931NB-ARC2133648.9e-1555.4
TkA02G106900PF25199nSTAND_NTPase52142600.03314.7
TkA02G106900PF24883NPHP3_N2152420.04514.7
TkA02G106900PF13401AAA_222162770.0714.2
TkA02G106900PF20720nSTAND32172420.0414.3
TkA02G106900PF25201nSTAND62172580.2212.3
TkA02G106900PF01443Viral_helicase12212440.05314.0
TkA02G106900PF22794jr-ZPR12813350.04114.5
TkA02G106900PF25199nSTAND_NTPase52933350.03314.7
TkA02G106900PF24883NPHP3_N3183340.04514.7
TkA02G106900PF25201nSTAND63764240.2212.3
TkA02G106900PF20720nSTAND34214540.0414.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9FKZ1Arabidopsis thalianasp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g6690035.900%Swiss-ProtMedium
Q9FKZ0Arabidopsis thalianasp|Q9FKZ0|DRL43_ARATH Probable disease resistance protein At5g6691031.400%Swiss-ProtMedium
Q9SZA7Arabidopsis thalianasp|Q9SZA7|DRL29_ARATH Probable disease resistance protein At4g3330031.500%Swiss-ProtMedium
Q9LVT1Arabidopsis thalianasp|Q9LVT1|DRL39_ARATH Putative disease resistance protein At5g4728033.000%Swiss-ProtMedium
Q9FW44Arabidopsis thalianasp|Q9FW44|ADR1_ARATH Disease resistance protein ADR131.300%Swiss-ProtMedium

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