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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G094750
Reference: TK1151 Chr: Chr02 Coordinates: 24755246-24757211 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1086 bp · TkA02G094750|TK1151|cDNA

ATGGCGGCTTCTTCATCTTCTTCTTCACCCGTTCAGACTTCTTCATCTGTTCAGAAGAGCTTCAAATATGATGTATTTTTTAGTTTTAGAGGTACAAACACTCGTAACTATTTTATCGATCATCTTTATCAGGCTCTTCAGGAGAAAGCTATCTACACTTACAAGGACGACGAGAGAATCACGAAAGGGAAAAGGATCCGTGATGAGCTTCCTGAATCCATTGAAGAGTCACAATTTTACATAATCGTTTTCTCAAAGAA...

CDS

Download CDS FASTA

1086 bp · TkA02G094750|TK1151|CDS

ATGGCGGCTTCTTCATCTTCTTCTTCACCCGTTCAGACTTCTTCATCTGTTCAGAAGAGCTTCAAATATGATGTATTTTTTAGTTTTAGAGGTACAAACACTCGTAACTATTTTATCGATCATCTTTATCAGGCTCTTCAGGAGAAAGCTATCTACACTTACAAGGACGACGAGAGAATCACGAAAGGGAAAAGGATCCGTGATGAGCTTCCTGAATCCATTGAAGAGTCACAATTTTACATAATCGTTTTCTCAAAGAA...

Protein

Download Protein FASTA

361 aa · TkA02G094750|TK1151|PROTEIN

MAASSSSSSPVQTSSSVQKSFKYDVFFSFRGTNTRNYFIDHLYQALQEKAIYTYKDDERITKGKRIRDELPESIEESQFYIIVFSKNYASSSWCLEELVKIMECHKTTKHTAYPVFFDVEPTEVRHQMGAVGEAFYMTLPKTFEAKNLVSLEMNSSKVEQLWVGGEHKVLDKLRFLNLGHSNLRTLDLRLAPNLEMVDLRGCNDLDSNKVEQLWVGGEHKVLDKLRFLNLGHSNLRTLDLRLAPNLEMVDLRGCNDLEKL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G094750
TK1151 IDTkA02G094750
OH-1004 IDLXL04_016866
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)86.700
Protein coverage (%)TK1151 37.396 / OH-1004 73.295
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G094750
LocationChr02:24755246-24757211 (-)
DescriptionNo functional description available
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g72930 Disease resistance protein. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_016866 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0007165 signal transduction Biological Process
GO:0009626 plant-type hypersensitive response Biological Process
GO:0019677 NAD+ catabolic process Biological Process
GO:0043068 positive regulation of programmed cell death Biological Process
GO:0050832 defense response to fungus Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0003953 NAD+ nucleosidase activity Molecular Function
KEGG gene cross-reference
ath:AT1G72930
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.432
Rank 1 · TkA02G094750 · TK1151
Cell membrane0.212
Rank 2 · TkA02G094750 · TK1151
Nucleus0.208
Rank 3 · TkA02G094750 · TK1151
Endoplasmic reticulum0.142
Rank 4 · TkA02G094750 · TK1151
Lysosome / Vacuole0.098
Rank 5 · TkA02G094750 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01582TIR22-137 aa
PF13676TIR_225-121 aa
PF21782WHD_PKMT31-76 aa
PF05075DUF68451-91 aa
PF12076CER1-like_C70-152 aa
PF25019LRR_R13L1-DRL21145-178 aa
PF12799LRR_4146-160 aa
PF13855LRR_8147-203 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G094750PF01582TIR221378.2e-38130.7
TkA02G094750PF13676TIR_2251215.7e-1453.4
TkA02G094750PF21782WHD_PKMT31760.009817.0
TkA02G094750PF05075DUF68451910.08312.6
TkA02G094750PF12076CER1-like_C701520.0813.4
TkA02G094750PF25019LRR_R13L1-DRL211451780.09213.4
TkA02G094750PF12799LRR_41461602.3e-0834.7
TkA02G094750PF13855LRR_81472031.6e-0525.2
TkA02G094750PF07725LRR_31471620.0002721.3
TkA02G094750PF14854LURAP1661940.05614.1
TkA02G094750PF12799LRR_41722052.3e-0834.7
TkA02G094750PF00560LRR_11721860.0002421.3
TkA02G094750PF00805Pentapeptide1732030.00119.3
TkA02G094750PF07725LRR_31751860.0002721.3
TkA02G094750PF25013LRR_Zer-11862053.58.5
TkA02G094750PF23286LRR_131902940.03114.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9SSN3Arabidopsis thalianasp|Q9SSN3|TIR_ARATH Toll/interleukin-1 receptor-like protein50.000%Swiss-ProtLow

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