Gene Card
Gene overview
cDNA / CDS / Protein Sequences
474 bp · TkA01G550590|TK1151|cDNA
ATGAAATCAATTTCATCTATTAATAGACGCTTGGAAATCTGGGAGATGTTTGTCTTCTTCCTTTATCTTCTGAGCAGGTGCCGCAGGTGTAGTTCGACGACTGCAATCGACGTCCCTTCTTCTCTCTCTGATGGCCTTCGGTTTGGGATTAGATGGGATTCCGCCAAATTCCAAGGTGCTACGGAGGAGATGGAAGACGATGCTATTGTGGTCGCTAACAACGAAGTTGATGGTTTCTATTTTGCTGCCGCCTTTTATGG...
474 bp · TkA01G550590|TK1151|CDS
ATGAAATCAATTTCATCTATTAATAGACGCTTGGAAATCTGGGAGATGTTTGTCTTCTTCCTTTATCTTCTGAGCAGGTGCCGCAGGTGTAGTTCGACGACTGCAATCGACGTCCCTTCTTCTCTCTCTGATGGCCTTCGGTTTGGGATTAGATGGGATTCCGCCAAATTCCAAGGTGCTACGGAGGAGATGGAAGACGATGCTATTGTGGTCGCTAACAACGAAGTTGATGGTTTCTATTTTGCTGCCGCCTTTTATGG...
Protein
Download Protein FASTA157 aa · TkA01G550590|TK1151|PROTEIN
MKSISSINRRLEIWEMFVFFLYLLSRCRRCSSTTAIDVPSSLSDGLRFGIRWDSAKFQGATEEMEDDAIVVANNEVDGFYFAAAFYGRGFLHGILLLQLLLIQMCGSLFWKRKNLWIFSNLIKQYVADNLSNKIVMELNGVLNKCGLVILKNVSISP
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G550590 |
|---|---|
| TK1151 ID | TkA01G550590 |
| OH-1004 ID | LXL04_009670 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 99.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G550590 |
|---|---|
| Location | Chr01:138406539-138407309 (+) |
| Description | Similar to Os01g0552300: Probable protein phosphatase 2C 5 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0007165 signal transduction Biological Process GO:0009767 photosynthetic electron transport chain Biological Process GO:0016311 dephosphorylation Biological Process GO:0080005 photosystem stoichiometry adjustment Biological Process GO:0005634 nucleus Cellular Component GO:0005730 nucleolus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0009507 chloroplast Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0009579 thylakoid Cellular Component GO:0016020 membrane Cellular Component GO:0000287 magnesium ion binding Molecular Function |
| KEGG gene cross-reference | ath:AT4G27800 dosa:Os01g0552300 osa:4325851 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.