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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA01G461770
Reference: TK1151 Chr: Chr01 Coordinates: 115734488-115739422 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

2137 bp · TkA01G461770|TK1151|cDNA

GCACATCTTGTCTCTGTTACAGTTGCTTCGCCGATATTATTGTCTCTTTTACCCTACTCTTTCAGAATCATTAATATCCGCAAATTGTATGAGTCTTTGAGAGTTCCTGTTTCCTTTAGATAGTGGGGTTTCATCCAACAGTGTATTTACACACAAATCCAGCATAGTCAAGCTCAAATCGTCGCTTTCTAAACATAGATTAAACCAAAAGGGTATCCTTTTTCCAGGAAAGAAAAGTCCAATCTTGTGATTCTGTTTCT...

1314 bp · TkA01G461770|TK1151|CDS

ATGACCGTCGAGATGCACGCCGGACTTGCCTCCGATGGCGGCAGCAAGCTCAAGATGCTAATCAGCTACGTTGACAACCTCCCCACTGGGGACGAAACTGGAATTTTCTATGCTCTTGATCTTGGGGGTACAAACTTCCGTGTTCTTCGGGTGAAATTGGGTGGAGCTGACAATGTGAAGAAAGAATTTACAGAAGTTTCAATTCCTTCACATCTCATGACTGGAACATGTGAAGATTTATTTGATTTTATTGCTGGAGA...

437 aa · TkA01G461770|TK1151|PROTEIN

MTVEMHAGLASDGGSKLKMLISYVDNLPTGDETGIFYALDLGGTNFRVLRVKLGGADNVKKEFTEVSIPSHLMTGTCEDLFDFIAGELAKFVATEGEDMHITAGTQRELGFTFSFPVKQSSIAGGTLVRWTKGFNIEDAVGQDVVDELTKAMERIGLDMRVSALVNDTVGTLAGGRYSNTNVIAAVILGTGTNAAYVERANAIPKWQGLLPKSGEMVINMEWGNFRSSHLPLTEFDENLDNASLNPGEQIFEKIISGMYL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G461770
TK1151 IDTkA01G461770
OH-1004 IDLXL04_002486
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 87.751
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G461770
LocationChr01:115734488-115739422 (-)
DescriptionSimilar to HXK2: Hexokinase-2
Arabidopsis / Rice Reference Genes and Papers
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_002486 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0001678 intracellular glucose homeostasis Biological Process
GO:0006006 glucose metabolic process Biological Process
GO:0006096 glycolytic process Biological Process
GO:0006357 regulation of transcription by RNA polymerase II Biological Process
GO:0009747 hexokinase-dependent signaling Biological Process
GO:0010148 transpiration Biological Process
GO:0010182 sugar mediated signaling pathway Biological Process
GO:0010255 glucose mediated signaling pathway Biological Process
GO:0012501 programmed cell death Biological Process
GO:0019320 hexose catabolic process Biological Process
GO:0051156 glucose 6-phosphate metabolic process Biological Process
GO:0090332 stomatal closure Biological Process
KEGG gene cross-reference
ath:AT2G19860
ath:AT4G29130
nta:107797523
sot:102577690
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.777
Rank 1 · TkA01G461770 · TK1151
Nucleus0.326
Rank 2 · TkA01G461770 · TK1151
Mitochondrion0.080
Rank 3 · TkA01G461770 · TK1151
Peroxisome0.061
Rank 4 · TkA01G461770 · TK1151
Cell membrane0.050
Rank 5 · TkA01G461770 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00349Hexokinase_11-177 aa
PF25677Chimallin_Phikzvirus142-193 aa
PF03727Hexokinase_2184-425 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G461770PF00349Hexokinase_111772.2e-68230.7
TkA01G461770PF25677Chimallin_Phikzvirus1421930.3110.1
TkA01G461770PF03727Hexokinase_21844253.7e-85285.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q42525Arabidopsis thalianasp|Q42525|HXK1_ARATH Hexokinase-174.900%Swiss-ProtHigh
P93834Arabidopsis thalianasp|P93834|HXK2_ARATH Hexokinase-274.400%Swiss-ProtHigh

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