Gene Card
Gene overview
cDNA / CDS / Protein Sequences
303 bp · TkA01G443030|TK1151|cDNA
ATGAAAATCAGCGGCTCTTCAAGCTCTTCAACCTCGGGGACACCGGATCTTCAAGGTGTAGGAGACGGAGAAGCGGCGGCGAAGCTCGGTAGTCGCCTATCGGCGCCTCTTCAAAGGAATTACCTGAAATCCGACTGTGAGGGAGGAGGAAGAGCTCGTTCTGTAGCCGGAGAAGGAGCTGTGGCCGGAGGGTGCAGCACCGGCGTTGAAATCGATTTGCAGGAGGCGGAGTCAAGAGTCGATTTGCAGGAGGCGGAGGC...
303 bp · TkA01G443030|TK1151|CDS
ATGAAAATCAGCGGCTCTTCAAGCTCTTCAACCTCGGGGACACCGGATCTTCAAGGTGTAGGAGACGGAGAAGCGGCGGCGAAGCTCGGTAGTCGCCTATCGGCGCCTCTTCAAAGGAATTACCTGAAATCCGACTGTGAGGGAGGAGGAAGAGCTCGTTCTGTAGCCGGAGAAGGAGCTGTGGCCGGAGGGTGCAGCACCGGCGTTGAAATCGATTTGCAGGAGGCGGAGTCAAGAGTCGATTTGCAGGAGGCGGAGGC...
Protein
Download Protein FASTA100 aa · TkA01G443030|TK1151|PROTEIN
MKISGSSSSSTSGTPDLQGVGDGEAAAKLGSRLSAPLQRNYLKSDCEGGGRARSVAGEGAVAGGCSTGVEIDLQEAESRVDLQEAEAGVDLQEAVVDLRW
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G443030 |
|---|---|
| TK1151 ID | TkA01G443030 |
| OH-1004 ID | LXL04_002263 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 98.700 |
| Protein coverage (%) | TK1151 79.000 / OH-1004 36.916Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G443030 |
|---|---|
| Location | Chr01:110811139-110812473 (-) |
| Description | Similar to SSL6: Protein STRICTOSIDINE SYNTHASE-LIKE 6 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009611 response to wounding Biological Process GO:0009615 response to virus Biological Process GO:0009620 response to fungus Biological Process GO:0009723 response to ethylene Biological Process GO:0009751 response to salicylic acid Biological Process GO:0009753 response to jasmonic acid Biological Process GO:0005773 vacuole Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0016787 hydrolase activity Molecular Function |
| KEGG gene cross-reference | ath:AT3G51420 ath:AT3G51430 ath:AT3G51440 ath:AT3G51450 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.