Gene Card
Gene overview
cDNA / CDS / Protein Sequences
357 bp · TkA01G169430|TK1151|cDNA
ATGGCCCACACATGGCAAAAATATCAGTTTTTGAGGCCAATAGACTCTCAAAGAATAACCTCAATTGGGTATTGTGAGATTGATCTTTTCGAATTTCTAAGTCGGGTTTCAGATTCTGATATTGAGGTGTTTGATTTTCCTGATCCATCATCATCAAATTGGGCTGTTAACAGATGGGACAAAGGGGCTGCTGACCGGGATGGTCAGTTTTTGGGCAGTGGAGTCCGAATGCAGTCCCAGGGAGGAAAACAGAAAAAGGG...
357 bp · TkA01G169430|TK1151|CDS
ATGGCCCACACATGGCAAAAATATCAGTTTTTGAGGCCAATAGACTCTCAAAGAATAACCTCAATTGGGTATTGTGAGATTGATCTTTTCGAATTTCTAAGTCGGGTTTCAGATTCTGATATTGAGGTGTTTGATTTTCCTGATCCATCATCATCAAATTGGGCTGTTAACAGATGGGACAAAGGGGCTGCTGACCGGGATGGTCAGTTTTTGGGCAGTGGAGTCCGAATGCAGTCCCAGGGAGGAAAACAGAAAAAGGG...
Protein
Download Protein FASTA118 aa · TkA01G169430|TK1151|PROTEIN
MAHTWQKYQFLRPIDSQRITSIGYCEIDLFEFLSRVSDSDIEVFDFPDPSSSNWAVNRWDKGAADRDGQFLGSGVRMQSQGGKQKKGQIKISIQGQSWVFFGTVFSCSVLGCCVVSWG
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G169430 |
|---|---|
| TK1151 ID | TkA01G169430 |
| OH-1004 ID | LXL04_009966 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 96.900 |
| Protein coverage (%) | TK1151 27.119 / OH-1004 15.166Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G169430 |
|---|---|
| Location | Chr01:43461015-43461617 (-) |
| Description | Similar to PSD2: Phosphatidylserine decarboxylase proenzyme 2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006646 phosphatidylethanolamine biosynthetic process Biological Process GO:0016540 protein autoprocessing Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005774 vacuolar membrane Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0009705 plant-type vacuole membrane Cellular Component GO:0004609 phosphatidylserine decarboxylase activity Molecular Function GO:0005509 calcium ion binding Molecular Function |
| KEGG gene cross-reference | ath:AT4G25970 ath:AT5G57190 dosa:Os01g0959800 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.