Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1932 bp · TkA01G147610|TK1151|cDNA
GCACAATCTCCCCACCACTTCTACTTAAACTACTCACGTCTTCAAACTAATACCACTCAAACGGAGTTCAACAATGGCAAAAGGTTCATCGAAATTATGGGTGTGTTTGCTGCTAGCGATTGTGGTGGCAAATGCACTGGTGGACGGAGTTAAAGGACAAGGTGGAAGTCGGTGGGAGGAAGACGCGGGGGAGGAGGCAAGAAGGGGGAGGAGAGAGGTCCCGCCGGAGTCTCAACGTGGTGGTAGTGGGAGAAGACAGG...
1689 bp · TkA01G147610|TK1151|CDS
ATGGCAAAAGGTTCATCGAAATTATGGGTGTGTTTGCTGCTAGCGATTGTGGTGGCAAATGCACTGGTGGACGGAGTTAAAGGACAAGGTGGAAGTCGGTGGGAGGAAGACGCGGGGGAGGAGGCAAGAAGGGGGAGGAGAGAGGTCCCGCCGGAGTCTCAACGTGGTGGTAGTGGGAGAAGACAGGTACCACCGGAATCTGAACGTGGTTATGGTGGTGGTGGGCGTAGGGAGATGCAGCCGGAGGAACCTGGTCGTGG...
Protein
Download Protein FASTA562 aa · TkA01G147610|TK1151|PROTEIN
MAKGSSKLWVCLLLAIVVANALVDGVKGQGGSRWEEDAGEEARRGRREVPPESQRGGSGRRQVPPESERGYGGGGRREMQPEEPGRGGAGGRSGGGKRGGTDSRRFILQDARRVVATDAGGMRVVKGVGGKLSESPMHIGFITMEPNSMFIPQYLDSSLIIFVELGEARIGSIYNDDFVEKDLKSGDLYRIQAGSAFYIVNTAEGQRLHIITSIDTAESSDWSAFQSFYIGGGANPSSVLAGFDIQTLSTALNVSHDAVG...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G147610 |
|---|---|
| TK1151 ID | TkA01G147610 |
| OH-1004 ID | LXL04_004456 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.800 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G147610 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:37354777-37357027 (-) | |||||||||
| Description | Similar to At2g28490: Vicilin-like seed storage protein At2g28490 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0010431 seed maturation Biological Process GO:0031640 killing of cells of another organism Biological Process GO:0042742 defense response to bacterium Biological Process GO:0050832 defense response to fungus Biological Process GO:0005576 extracellular region Cellular Component GO:0005773 vacuole Cellular Component GO:0009506 plasmodesma Cellular Component GO:0043245 extraorganismal space Cellular Component GO:0019863 IgE binding Molecular Function GO:0045735 nutrient reservoir activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G18540 ath:AT2G28490 ath:AT4G36700 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00190Cupin_1112-217 aaPF07883Cupin_2142-210 aaPF25788Ig_Rha78A_N216-231 aaPF25788Ig_Rha78A_N299-325 aaPF25788Ig_Rha78A_N336-375 aaPF00190Cupin_1345-492 aaPF07883Cupin_2381-436 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G147610 | PF00190 | Cupin_1 | 112 | 217 | 2.1e-38 | 132.0 |
| TkA01G147610 | PF07883 | Cupin_2 | 142 | 210 | 3.9e-06 | 27.2 |
| TkA01G147610 | PF25788 | Ig_Rha78A_N | 216 | 231 | 1.1 | 10.2 |
| TkA01G147610 | PF25788 | Ig_Rha78A_N | 299 | 325 | 1.1 | 10.2 |
| TkA01G147610 | PF25788 | Ig_Rha78A_N | 336 | 375 | 1.1 | 10.2 |
| TkA01G147610 | PF00190 | Cupin_1 | 345 | 492 | 2.1e-38 | 132.0 |
| TkA01G147610 | PF07883 | Cupin_2 | 381 | 436 | 3.9e-06 | 27.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.