Gene Card
Gene overview
cDNA / CDS / Protein Sequences
372 bp · TkA01G108650|TK1151|cDNA
ATGGATTGCCGCTGCTCGGACCATTCGTTGACCGGCTTGACTACTCCTGGTTCCAAGGATCCGATGATTTTTTCAGGAAGAGGATCGAGAAGAATCAGAGCACGGTGTTCCGTACAAATGTTCCGCCGTCCTTCCCCTTTTTTTCTCGCTAATCCGAACGTCGTTGCGGTGCTGGACTGTAAGTCGTTCGCTCATATCTTTGATATGGAACTCGTGGTTAAGAAGAACATTCTCGTCGGTGATTTCATGCCTAGCACTAA...
372 bp · TkA01G108650|TK1151|CDS
ATGGATTGCCGCTGCTCGGACCATTCGTTGACCGGCTTGACTACTCCTGGTTCCAAGGATCCGATGATTTTTTCAGGAAGAGGATCGAGAAGAATCAGAGCACGGTGTTCCGTACAAATGTTCCGCCGTCCTTCCCCTTTTTTTCTCGCTAATCCGAACGTCGTTGCGGTGCTGGACTGTAAGTCGTTCGCTCATATCTTTGATATGGAACTCGTGGTTAAGAAGAACATTCTCGTCGGTGATTTCATGCCTAGCACTAA...
Protein
Download Protein FASTA123 aa · TkA01G108650|TK1151|PROTEIN
MDCRCSDHSLTGLTTPGSKDPMIFSGRGSRRIRARCSVQMFRRPSPFFLANPNVVAVLDCKSFAHIFDMELVVKKNILVGDFMPSTKFIGDRRVCAYLDTAEHQHEQVCFNFTLFRVNFRIAL
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G108650 |
|---|---|
| TK1151 ID | TkA01G108650 |
| OH-1004 ID | LXL04_034980 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 93.500 |
| Protein coverage (%) | TK1151 50.407 / OH-1004 25.306Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G108650 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:27566586-27566957 (+) | |||||||||
| Description | Similar to HPL: Fatty acid hydroperoxide lyase, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006633 fatty acid biosynthetic process Biological Process GO:0006952 defense response Biological Process GO:0009695 jasmonic acid biosynthetic process Biological Process GO:0010597 green leaf volatile biosynthetic process Biological Process GO:0016125 sterol metabolic process Biological Process GO:0031408 oxylipin biosynthetic process Biological Process GO:0009507 chloroplast Cellular Component GO:0009706 chloroplast inner membrane Cellular Component GO:0009707 chloroplast outer membrane Cellular Component GO:0004497 monooxygenase activity Molecular Function GO:0005506 iron ion binding Molecular Function GO:0009978 allene oxide synthase activity Molecular Function | |||||||||
| KEGG gene cross-reference | sly:101266902 sly:543642 sly:606711 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.