Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1545 bp · TkA01G099910|TK1151|cDNA
ATGGACAGGTTAATAAGTCTGGAGCCATCGAATGTGGTTGTAATACGGGTGGAACAAGGCCAAAAATGCTCCGGTAAGCTCACTTTGAGAAACGTCATGTACACCATGCCGGTGGCTTTCCGCCTTCAACCGGTGAATAAACTCCGGTACACCGTCCGTCCACACTCTGGAATCATACATCCGTTGACAACTGTCACTCTCGAGATCACTTATAATCTCCCGCCAAATTCAATCCTCCCGGAATCGTACCCTTACTGTGG...
1545 bp · TkA01G099910|TK1151|CDS
ATGGACAGGTTAATAAGTCTGGAGCCATCGAATGTGGTTGTAATACGGGTGGAACAAGGCCAAAAATGCTCCGGTAAGCTCACTTTGAGAAACGTCATGTACACCATGCCGGTGGCTTTCCGCCTTCAACCGGTGAATAAACTCCGGTACACCGTCCGTCCACACTCTGGAATCATACATCCGTTGACAACTGTCACTCTCGAGATCACTTATAATCTCCCGCCAAATTCAATCCTCCCGGAATCGTACCCTTACTGTGG...
Protein
Download Protein FASTA514 aa · TkA01G099910|TK1151|PROTEIN
MDRLISLEPSNVVVIRVEQGQKCSGKLTLRNVMYTMPVAFRLQPVNKLRYTVRPHSGIIHPLTTVTLEITYNLPPNSILPESYPYCGDPFFLHSVVVPGAGVKNSTSNDSIPHDWFTTKKKQVFVDSGIKIMFVGPSVIATLITNGYIDEIRDVLEKSDPSWKTVDSVDSKGQTLLHLAIAQHRADLVQVLLEYEPDIMSRSRSGSTPLEAAVASGEGLIVELLLAHRANTERVDPSACGPIHLAAESGHIDILKLLLSK...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G099910 |
|---|---|
| TK1151 ID | TkA01G099910 |
| OH-1004 ID | LXL04_012926 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 54.200 |
| Protein coverage (%) | TK1151 78.016 / OH-1004 74.860Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G099910 |
|---|---|
| Location | Chr01:25281016-25282560 (+) |
| Description | Similar to VPY: Protein VAPYRIN |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0002237 response to molecule of bacterial origin Biological Process GO:0009609 response to symbiotic bacterium Biological Process GO:0009610 response to symbiotic fungus Biological Process GO:0009877 nodulation Biological Process GO:0010247 detection of phosphate ion Biological Process GO:0015969 guanosine tetraphosphate metabolic process Biological Process GO:0036377 arbuscular mycorrhizal association Biological Process GO:0085020 protein K6-linked ubiquitination Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component |
| KEGG gene cross-reference | mtr:11415982 mtr:25495843 rfe:RF_0381 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00635Motile_Sperm5-73 aaPF07555NAGidase125-188 aaPF13637Ank_4146-192 aaPF18418AnkUBD161-192 aaPF12796Ank_2164-233 aaPF13857Ank_5167-210 aaPF00023Ank172-200 aaPF13606Ank_3172-198 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G099910 | PF00635 | Motile_Sperm | 5 | 73 | 1.2e-06 | 29.0 |
| TkA01G099910 | PF07555 | NAGidase | 125 | 188 | 0.32 | 11.1 |
| TkA01G099910 | PF13637 | Ank_4 | 146 | 192 | 2.1e-44 | 149.3 |
| TkA01G099910 | PF18418 | AnkUBD | 161 | 192 | 3.7e-06 | 27.7 |
| TkA01G099910 | PF12796 | Ank_2 | 164 | 233 | 3.9e-60 | 201.1 |
| TkA01G099910 | PF13857 | Ank_5 | 167 | 210 | 7.4e-49 | 163.9 |
| TkA01G099910 | PF00023 | Ank | 172 | 200 | 8.2e-59 | 192.9 |
| TkA01G099910 | PF13606 | Ank_3 | 172 | 198 | 9.9e-45 | 145.5 |
| TkA01G099910 | PF13637 | Ank_4 | 176 | 225 | 2.1e-44 | 149.3 |
| TkA01G099910 | PF24521 | Ank_KRIT1 | 181 | 228 | 3.2e-15 | 56.9 |
| TkA01G099910 | PF00023 | Ank | 205 | 235 | 8.2e-59 | 192.9 |
| TkA01G099910 | PF13606 | Ank_3 | 205 | 229 | 9.9e-45 | 145.5 |
| TkA01G099910 | PF23745 | ANK_LRRK2 | 206 | 291 | 0.00024 | 21.7 |
| TkA01G099910 | PF24521 | Ank_KRIT1 | 207 | 261 | 3.2e-15 | 56.9 |
| TkA01G099910 | PF13857 | Ank_5 | 232 | 278 | 7.4e-49 | 163.9 |
| TkA01G099910 | PF12796 | Ank_2 | 239 | 298 | 3.9e-60 | 201.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.