TkA01G075350 | RubberDandelionOmics

Gene overview

TkA01G075350

Reference: TK1151 Chr: Chr01 Coordinates: 19274339-19275004 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

366 bp · TkA01G075350|TK1151|cDNA

ATGGCTGCTGGTTTTTTGCGGTTTTTGTGCTGCTGGTTTCGATTGGTTTTTGTGTTGCTGGATGTTGATCCTATTGTGGCAGTGTTCTCTGCAGGACCAGTTGGTGTATCCAGCTTTAGCAATTGCTGTCTTAAGCAACTCATTAGGATCAACAACCCTTCTATTGTAATGAATGTGGCATGGATCCTATGGAGGAACAATGAAACTGTTTGCAATCAGGGGCAATTATGGAACAAAGTTGAGGATGATGTGGTTTCAAA...

CDS

Download CDS FASTA

366 bp · TkA01G075350|TK1151|CDS

ATGGCTGCTGGTTTTTTGCGGTTTTTGTGCTGCTGGTTTCGATTGGTTTTTGTGTTGCTGGATGTTGATCCTATTGTGGCAGTGTTCTCTGCAGGACCAGTTGGTGTATCCAGCTTTAGCAATTGCTGTCTTAAGCAACTCATTAGGATCAACAACCCTTCTATTGTAATGAATGTGGCATGGATCCTATGGAGGAACAATGAAACTGTTTGCAATCAGGGGCAATTATGGAACAAAGTTGAGGATGATGTGGTTTCAAA...

Protein

Download Protein FASTA

121 aa · TkA01G075350|TK1151|PROTEIN

MAAGFLRFLCCWFRLVFVLLDVDPIVAVFSAGPVGVSSFSNCCLKQLIRINNPSIVMNVAWILWRNNETVCNQGQLWNKVEDDVVSNRLVYWRWVLKWRFHVISLWQQIAVYTLKLILRWS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA01G075350`
TK1151 ID	TkA01G075350
OH-1004 ID	LXL04_015664
Relationship / confidence	Multi Candidate From Tk1151 / Complex relationship
Protein identity (%)	99.000
Protein coverage (%)	TK1151 82.645 / OH-1004 36.364 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID	`TkA01G075350`
Location	Chr01:19274339-19275004 (+)
Description	Similar to ENO1: Enolase
Arabidopsis / Rice Reference Genes and Papers	Download references for this gene Arabidopsis No hit for this species in the current source table. Rice No hit for this species in the current source table.
Functional annotation source	View annotation sources Functional annotation source: OH1004 · `LXL04_015664` · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
GO annotations (OH1004 source)	GO:0006096 glycolytic process Biological Process GO:0006351 DNA-templated transcription Biological Process GO:0009409 response to cold Biological Process GO:0009416 response to light stimulus Biological Process GO:0009737 response to abscisic acid Biological Process GO:0046686 response to cadmium ion Biological Process GO:0000015 phosphopyruvate hydratase complex Cellular Component GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005740 mitochondrial envelope Cellular Component GO:0005741 mitochondrial outer membrane Cellular Component
KEGG gene cross-reference	ath:AT2G36530 dosa:Os10g0167300 rcu:8288376 zma:542316 zma:732811 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.278

Rank 1 · TkA01G075350 · TK1151

Cytoplasm0.277

Rank 2 · TkA01G075350 · TK1151

Mitochondrion0.183

Rank 3 · TkA01G075350 · TK1151

Endoplasmic reticulum0.136

Rank 4 · TkA01G075350 · TK1151

Cell membrane0.115

Rank 5 · TkA01G075350 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

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Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF30754Orange_mid18-38 aa

Gene ID	Domain ID	Domain Name	Start aa	End aa	E-value	Score
TkA01G075350	`PF30754`	Orange_mid	18	38	0.01	16.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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