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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G068150
Reference: TK1151 Chr: Chr01 Coordinates: 17477709-17481914 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2296 bp · TkA01G068150|TK1151|cDNA

ACTCTGTTTTGCTGTTTACCTATGTTAGGTAGTAGGTTCTCTCACGACTAACATATTAGAGGAACTGGATGGTCCGACCGTTGGCCACGTCCCCTGCAATTTTCTTTCAGACATGGCGGAACTTTGCATTCTCTTCTCTCCTTATATAATCAAATTCATCAATGGCGATCTCCTTTTCCTTCCGCGTGATCCACGAAGCAAATCCAATCTCTCTACACAACGAAGACGACTATGAGTCGCTTAATTTCATCCTTTCGCTC...

CDS

Download CDS FASTA

1785 bp · TkA01G068150|TK1151|CDS

ATGAGTCGCTTAATTTCATCCTTTCGCTCCCTAGGGTTTGCAACTCGACGCCGGACCGCGTGCTTTCCGGCCAATGCCCTTCGCTTATACTCCGATCATCATCAATTCTCAACTTCCAACACTCCAGGACCGCTTACACAGTATAAAAAGCTCGTCAAGGAAGGACAACTCCAATTCGATCCTTACCAAGAAAAAGTCGCGTTAGAACTTGATAACTTACTTCAACGATTACAACAATATGAGAAAGAAATGCAAGAGTA...

Protein

Download Protein FASTA

594 aa · TkA01G068150|TK1151|PROTEIN

MSRLISSFRSLGFATRRRTACFPANALRLYSDHHQFSTSNTPGPLTQYKKLVKEGQLQFDPYQEKVALELDNLLQRLQQYEKEMQEYHVKLANWEESRENERRRLLLKEAESKQHRSESLDKTHNRFLGKWLDRKKSVNVEPGVGKWVSYLNRERKLDSVVGKCPTVPPAPKGLYIYGNVGSGKTMLMDMFYNSTNQIVTHRRRFHFHEAMLEINERMHKIWKNQVKEKSMQSSIANWIMNLPFDTKVKEWVASEESYKE...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G068150
TK1151 IDTkA01G068150
OH-1004 IDLXL04_028266
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)30.800
Protein coverage (%)TK1151 67.508 / OH-1004 65.400
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G068150
LocationChr01:17477709-17481914 (+)
DescriptionSimilar to AFG1L: AFG1-like ATPase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_028266 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0003341 cilium movement Biological Process
GO:0007005 mitochondrion organization Biological Process
GO:0035694 mitochondrial protein catabolic process Biological Process
GO:0141164 mitochondrial protein quality control Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0031966 mitochondrial membrane Cellular Component
GO:0005524 ATP binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
KEGG gene cross-reference
dre:555926
hsa:246269
mmu:215951
rno:502479
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.904
Rank 1 · TkA01G068150 · TK1151
Cytoplasm0.098
Rank 2 · TkA01G068150 · TK1151
Nucleus0.088
Rank 3 · TkA01G068150 · TK1151
Cell membrane0.025
Rank 4 · TkA01G068150 · TK1151
Peroxisome0.019
Rank 5 · TkA01G068150 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03969AFG1_ATPase44-85 aa
PF23067MG28048-125 aa
PF19902DUF637551-110 aa
PF24883NPHP3_N72-106 aa
PF00005ABC_tran77-92 aa
PF13555AAA_2989-96 aa
PF01637ATPase_2151-296 aa
PF03969AFG1_ATPase161-502 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G068150PF03969AFG1_ATPase44852.4e-65221.6
TkA01G068150PF23067MG280481250.6410.2
TkA01G068150PF19902DUF6375511102.69.4
TkA01G068150PF24883NPHP3_N721060.3411.8
TkA01G068150PF00005ABC_tran77920.2512.7
TkA01G068150PF13555AAA_2989960.1312.7
TkA01G068150PF01637ATPase_21512962.9e-0834.5
TkA01G068150PF03969AFG1_ATPase1615022.4e-65221.6
TkA01G068150PF13555AAA_291661890.1312.7
TkA01G068150PF13191AAA_161692980.02515.8
TkA01G068150PF19557BrxC-PglY_N1712320.02914.4
TkA01G068150PF24883NPHP3_N1731980.3411.8
TkA01G068150PF13401AAA_221742080.01116.7
TkA01G068150PF00308Bac_DnaA1742050.02115.8
TkA01G068150PF00005ABC_tran1742830.2512.7
TkA01G068150PF00004AAA1752240.04514.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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