Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1515 bp · LXL04_040167|LXL04_040167|OH1004|cDNA
ATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGGGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGCGCAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGTGTTGGGTCTGCCGCTCAGTTGAAAACTATGAAACAAGTCTGCGGTAGTTCAAAACTGGGAATTGGCACAATATCGTTTATTAGAAGTGA...
1515 bp · LXL04_040167|LXL04_040167|OH1004|CDS
ATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGGGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGCGCAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGTGTTGGGTCTGCCGCTCAGTTGAAAACTATGAAACAAGTCTGCGGTAGTTCAAAACTGGGAATTGGCACAATATCGTTTATTAGAAGTGA...
Protein
Download Protein FASTA504 aa · LXL04_040167|LXL04_040167|OH1004|PROTEIN
MSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAELFYRGIRPAINVGLSVSRVGSAAQLKTMKQVCGSSKLGIGTISFIRSDNRVVVPAKVIYVLFVTSADVLHSWAVSSSGVKCDAVPGRLNQTSISVQREGVYYGQCSEICGTNNTFMRALGKIGRLLSPLWLSRTTRKEPLNDRNQTGAAFLIYQVKRVRLIAIGVTIEGMNRKGYSPKMPKRWGPLSLGSKVFSAERNCWVRLPSPFIFPQCYRSWIPKPN...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_040167 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_040167 |
|---|---|
| Location | JAJTUU010000520.1:248-3297 (-) |
| Description | Similar to COX2: Cytochrome c oxidase subunit 2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0015986 proton motive force-driven ATP synthesis Biological Process GO:0005743 mitochondrial inner membrane Cellular Component GO:0031966 mitochondrial membrane Cellular Component GO:0045259 proton-transporting ATP synthase complex Cellular Component GO:0005524 ATP binding Molecular Function GO:0043531 ADP binding Molecular Function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Molecular Function GO:0051087 protein-folding chaperone binding Molecular Function |
| KEGG gene cross-reference | han:18250974 rsz:13630159 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00006.32ATP-synt_ab1-37 aaPF00116.27COX273-156 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_040167 | PF00006.32 | ATP-synt_ab | 1 | 37 | 5.3e-10 | 40.0 |
| LXL04_040167 | PF00116.27 | COX2 | 73 | 156 | 1.1e-30 | 106.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.