Gene Card
Gene overview
cDNA / CDS / Protein Sequences
691 bp · LXL04_039197|LXL04_039197|OH1004|cDNA
AAGTTGAAGTACGAGAAAGCCTTACACGACGATGGCACAGGCCAAGGAGGTGCACTTTTCCCCGATGGATTCAGCCAACGGCGATAAGCCTCTGAGAAAGATTTCAGAGGCATTCAAGGACATAGCGAACTGTATCAACTCCCAAAACCAGAACCCCCAACAACTGGAGTTAGCCCCTTTCTCTCGGGCCTGTTCTCTTGTTTCCCCTTTGTTCCGATGCCTAGGTATTGCTTTCAAGTTCGCTGAAATGGACTATGTCG...
660 bp · LXL04_039197|LXL04_039197|OH1004|CDS
ATGGCACAGGCCAAGGAGGTGCACTTTTCCCCGATGGATTCAGCCAACGGCGATAAGCCTCTGAGAAAGATTTCAGAGGCATTCAAGGACATAGCGAACTGTATCAACTCCCAAAACCAGAACCCCCAACAACTGGAGTTAGCCCCTTTCTCTCGGGCCTGTTCTCTTGTTTCCCCTTTGTTCCGATGCCTAGGTATTGCTTTCAAGTTCGCTGAAATGGACTATGTCGCCAAGGTAAATGATCTTTGTGAGACTTCAAA...
Protein
Download Protein FASTA219 aa · LXL04_039197|LXL04_039197|OH1004|PROTEIN
MAQAKEVHFSPMDSANGDKPLRKISEAFKDIANCINSQNQNPQQLELAPFSRACSLVSPLFRCLGIAFKFAEMDYVAKVNDLCETSKSISTLQSMMEKDIEANCVRKPGSHTRNLLRVKRGLDMVRILFEEIIVSEENSLKNPASKAYSEVFSPYHGWAVRKAVAAGMYALPTKAQLLQKLNEDEVSAKSEMQNYVAASTLVIVYIDRLFQSRELGIDW
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_039197 |
|---|---|
| TK1151 ID | TkA04G514750 |
| OH-1004 ID | LXL04_039197 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_039197 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr09:62058513-62059602 (+) | |||||||||
| Description | Similar to ACD11: Accelerated cell death 11 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009751 response to salicylic acid Biological Process GO:0035627 ceramide transport Biological Process GO:0042742 defense response to bacterium Biological Process GO:0120009 intermembrane lipid transfer Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0008289 lipid binding Molecular Function GO:0017089 glycolipid transfer activity Molecular Function GO:0051861 glycolipid binding Molecular Function GO:0120013 lipid transfer activity Molecular Function GO:0140338 sphingomyelin transfer activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G34690 ath:AT4G39670 bta:327678 dre:558007 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08718.17GLTP46-183 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_039197 | PF08718.17 | GLTP | 46 | 183 | 8.1e-43 | 146.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.