Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1413 bp · LXL04_039069|LXL04_039069|OH1004|cDNA
ATGTTAGGCATGAGGTTTTATGGGCATTTCCCCCTTGCATTTCTCTGGATTTTGATAGCAGGCAGTGAGACATTTTTGTTATCTAAAGGAGGGATTACTAGCACATTTATTAGAAACGAAGAAAAGAGCCTAGACATGCCTCTTGAAAGTGATGTTTTCCGTGTATCATCTGGCTATAATGCTCCTCAACAGGTTCATATAACACAAGGAGATCGTACTGGCAAAGCAGTGATAGTATCATGGGTGACTGAAGATGAACC...
1413 bp · LXL04_039069|LXL04_039069|OH1004|CDS
ATGTTAGGCATGAGGTTTTATGGGCATTTCCCCCTTGCATTTCTCTGGATTTTGATAGCAGGCAGTGAGACATTTTTGTTATCTAAAGGAGGGATTACTAGCACATTTATTAGAAACGAAGAAAAGAGCCTAGACATGCCTCTTGAAAGTGATGTTTTCCGTGTATCATCTGGCTATAATGCTCCTCAACAGGTTCATATAACACAAGGAGATCGTACTGGCAAAGCAGTGATAGTATCATGGGTGACTGAAGATGAACC...
Protein
Download Protein FASTA470 aa · LXL04_039069|LXL04_039069|OH1004|PROTEIN
MLGMRFYGHFPLAFLWILIAGSETFLLSKGGITSTFIRNEEKSLDMPLESDVFRVSSGYNAPQQVHITQGDRTGKAVIVSWVTEDEPGSSTVVYWSEDSSNKLEARGKVSTYKYYNYTSGYIHHCTIHNLEFNTKYYYKLGIGNTTRTFWFIVPPKVGPNVPYTFGIIGDLGQTYDSNRTLGNYEMNPVKGQSVLFLGDLSYADEYPFHDNLRWDTWGRFIERSAAYQPWIWTTGNHDLDYAPEIGETKPFKPFLNRYHV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_039069 |
|---|---|
| TK1151 ID | TkA04G501090 |
| OH-1004 ID | LXL04_039069 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 90.426Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_039069 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr09:58452963-58455268 (-) | |||||||||
| Description | Similar to PAP2: Purple acid phosphatase 2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0016036 cellular response to phosphate starvation Biological Process GO:0005576 extracellular region Cellular Component GO:0005615 extracellular space Cellular Component GO:0005737 cytoplasm Cellular Component GO:0009505 plant-type cell wall Cellular Component GO:0009506 plasmodesma Cellular Component GO:0003993 acid phosphatase activity Molecular Function GO:0008199 ferric iron binding Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0030145 manganese ion binding Molecular Function GO:0046872 metal ion binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G16430 ath:AT2G27190 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF16656.12Pur_ac_phosph_N62-151 aaPF00149.34Metallophos164-362 aaPF14008.12Metallophos_C388-444 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_039069 | PF16656.12 | Pur_ac_phosph_N | 62 | 151 | 1.7e-20 | 74.1 |
| LXL04_039069 | PF00149.34 | Metallophos | 164 | 362 | 4.5e-25 | 90.0 |
| LXL04_039069 | PF14008.12 | Metallophos_C | 388 | 444 | 8.3e-19 | 68.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.