Gene Card
Gene overview
cDNA / CDS / Protein Sequences
288 bp · LXL04_037075|LXL04_037075|OH1004|cDNA
ATGGCTCGATCTATTTCTAACGCCAAGCTTTTCTCATCGTTCCTTGTGGATCAACTCTCCGTTGTTGCCAGACGTGGATATGCGTCGACATCGACTGCTAGCGTATCTGGAAGTGTGAGGGGAAGCGGCGTTGCAATGATGAAGAAAGGAGGGGAGGAGTCGAAGAAATCGACTCCGTGGGTTCCAGATCCAGTGACAGGTTATTACAAGCCAGAGGGTCAAACGAACCAAGTTGATGCAGCCGACCTCCGTGAACTGCT...
288 bp · LXL04_037075|LXL04_037075|OH1004|CDS
ATGGCTCGATCTATTTCTAACGCCAAGCTTTTCTCATCGTTCCTTGTGGATCAACTCTCCGTTGTTGCCAGACGTGGATATGCGTCGACATCGACTGCTAGCGTATCTGGAAGTGTGAGGGGAAGCGGCGTTGCAATGATGAAGAAAGGAGGGGAGGAGTCGAAGAAATCGACTCCGTGGGTTCCAGATCCAGTGACAGGTTATTACAAGCCAGAGGGTCAAACGAACCAAGTTGATGCAGCCGACCTCCGTGAACTGCT...
Protein
Download Protein FASTA95 aa · LXL04_037075|LXL04_037075|OH1004|PROTEIN
MARSISNAKLFSSFLVDQLSVVARRGYASTSTASVSGSVRGSGVAMMKKGGEESKKSTPWVPDPVTGYYKPEGQTNQVDAADLRELLLKQKTRGH
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_037075 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_037075 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:52709033-52709502 (+) | |||||||||
| Description | Similar to LEA2: Late embryogenis abundant protein 2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000302 response to reactive oxygen species Biological Process GO:0006950 response to stress Biological Process GO:0006952 defense response Biological Process GO:0006979 response to oxidative stress Biological Process GO:0009409 response to cold Biological Process GO:0009414 response to water deprivation Biological Process GO:0009416 response to light stimulus Biological Process GO:0009611 response to wounding Biological Process GO:0009620 response to fungus Biological Process GO:0009625 response to insect Biological Process GO:0009646 response to absence of light Biological Process GO:0009651 response to salt stress Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT1G02820 ath:AT4G02380 cit:102610022 ghi:107896693 ghi:107916177 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF03242.19LEA_3a1-91 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_037075 | PF03242.19 | LEA_3a | 1 | 91 | 1.3e-30 | 106.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.