Gene Card
Gene overview
cDNA / CDS / Protein Sequences
654 bp · LXL04_037020|LXL04_037020|OH1004|cDNA
ATGAGATTATCGCCGGAAGCAACCACCCAAATGATCATAATACCTGCGCTGGTTATACTTACACAGATTAAAGCccttttggttctcaaattcGGGAATTTCAAGAACAATATCGTCTCTACCAGCAAAGACTATCCTAAGGCTAAGAATTTTCACGACATCTTGAATCCCATGACTCCACCGCTATTAGGTGTTGAAGGAGATGGACAGGGAAACGCCTCTATAGTAACCTCCGCTTCCACCATGGAATCAATCTTCCA...
654 bp · LXL04_037020|LXL04_037020|OH1004|CDS
ATGAGATTATCGCCGGAAGCAACCACCCAAATGATCATAATACCTGCGCTGGTTATACTTACACAGATTAAAGCCCTTTTGGTTCTCAAATTCGGGAATTTCAAGAACAATATCGTCTCTACCAGCAAAGACTATCCTAAGGCTAAGAATTTTCACGACATCTTGAATCCCATGACTCCACCGCTATTAGGTGTTGAAGGAGATGGACAGGGAAACGCCTCTATAGTAACCTCCGCTTCCACCATGGAATCAATCTTCCA...
Protein
Download Protein FASTA217 aa · LXL04_037020|LXL04_037020|OH1004|PROTEIN
MRLSPEATTQMIIIPALVILTQIKALLVLKFGNFKNNIVSTSKDYPKAKNFHDILNPMTPPLLGVEGDGQGNASIVTSASTMESIFQKSPGLTERNYFGLSNCSSVDSSAVSGIPELGLPGSQSPERDTEIDLTNSDSLDVKPLFPLLPSKDGICSSSPKLIVSGNKRGFSDTIEGNWMFVSFIIDSDSSKLQKKGTTTATQSSMIKDTTTSKQLQL
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_037020 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_037020 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:51795695-51796390 (+) | |||||||||
| Description | Similar to IAA9: Auxin-responsive protein IAA9 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0009733 response to auxin Biological Process GO:0009734 auxin-activated signaling pathway Biological Process GO:0010311 lateral root formation Biological Process GO:0045892 negative regulation of DNA-templated transcription Biological Process GO:1901332 negative regulation of lateral root development Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0000976 transcription cis-regulatory region binding Molecular Function GO:0003700 DNA-binding transcription factor activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G22670 ath:AT5G65670 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.