Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1197 bp · LXL04_035207|LXL04_035207|OH1004|cDNA
AAAATCAAGCAGGTGGTGGTATTTAAGGGCCCCTTGTTCACACAGAAGCTAACATGTGGTCTTCATCCATTCACCACCACCACTCCCTTCCACCGCCTCCCCTTTGGCCTTTTCTATACCTTCACTTCACAACGCCCTTCACTTCGTCTTCTTCCTCCACCCGCGCCCAATTCGCTCTCCTCATCTCTCACCAATCCCACAAACACTAAGCCTCGGAGAACCCTTTGCTTGCACTCCAGTTGGACGTCAATGGCGGCAGC...
1164 bp · LXL04_035207|LXL04_035207|OH1004|CDS
TTGTTCACACAGAAGCTAACATGTGGTCTTCATCCATTCACCACCACCACTCCCTTCCACCGCCTCCCCTTTGGCCTTTTCTATACCTTCACTTCACAACGCCCTTCACTTCGTCTTCTTCCTCCACCCGCGCCCAATTCGCTCTCCTCATCTCTCACCAATCCCACAAACACTAAGCCTCGGAGAACCCTTTGCTTGCACTCCAGTTGGACGTCAATGGCGGCAGCAATTGCCGTCGCTTCCAGCTCACGTTCCTTCCG...
Protein
Download Protein FASTA387 aa · LXL04_035207|LXL04_035207|OH1004|PROTEIN
MFTQKLTCGLHPFTTTTPFHRLPFGLFYTFTSQRPSLRLLPPPAPNSLSSSLTNPTNTKPRRTLCLHSSWTSMAAAIAVASSSRSFRFGRVPFLGQKPTSRTSQFPSSIRNFDPIFRFRRTPRLTVCFVAGDQKLGQIAENNDISSNNPGPSGEVPDVERTPVILSSNRVVEEKMARKKSERFTYLVAAIMSTFGITSMAVMAVYYRFSWQMEGGEAPFVEMFGTFALSVGAAVGMEYWARWAHEALWHASLWHMHESHH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_035207 |
|---|---|
| TK1151 ID | TkA04G154140 |
| OH-1004 ID | LXL04_035207 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.200 |
| Protein coverage (%) | TK1151 97.236 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_035207 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:17613559-17616425 (+) | |||||||||
| Description | Similar to BHY: Beta-carotene 3-hydroxylase, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0016117 carotenoid biosynthetic process Biological Process GO:0016119 carotene metabolic process Biological Process GO:0016123 xanthophyll biosynthetic process Biological Process GO:0009507 chloroplast Cellular Component GO:0031969 chloroplast membrane Cellular Component GO:0005506 iron ion binding Molecular Function GO:0010291 beta-carotene 3-hydroxylase activity Molecular Function GO:0016787 hydrolase activity Molecular Function GO:0046872 metal ion binding Molecular Function | |||||||||
| KEGG gene cross-reference | ag:ACF21782 ag:CAA70427 ag:CAA70888 ath:AT4G25700 ath:AT5G52570 cann:107863219 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.