Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1029 bp · LXL04_030665|LXL04_030665|OH1004|cDNA
ATGGGAATCGATTACTACAACGTCCTCAAAGTGAACAGAAATGCTAGCGAGGAAGACCTAAAAAAGGCTTACCGTCGTCTCGCCATGATTTGGCACCCGGATAGAAACCCTAGCAGTAACAAAAGCGAAGCGGAAGCGAAATTCAAGCAGATTTCTGAAGCGTATGATGTATTAAGCGACCCTAAGAAGCGTCAGATCTACGATCTCTATGGGGAAGAAGCTTTGAAGTCCGGCCAAGTACCTCCGCCCCATCCTTTTTC...
1029 bp · LXL04_030665|LXL04_030665|OH1004|CDS
ATGGGAATCGATTACTACAACGTCCTCAAAGTGAACAGAAATGCTAGCGAGGAAGACCTAAAAAAGGCTTACCGTCGTCTCGCCATGATTTGGCACCCGGATAGAAACCCTAGCAGTAACAAAAGCGAAGCGGAAGCGAAATTCAAGCAGATTTCTGAAGCGTATGATGTATTAAGCGACCCTAAGAAGCGTCAGATCTACGATCTCTATGGGGAAGAAGCTTTGAAGTCCGGCCAAGTACCTCCGCCCCATCCTTTTTC...
Protein
Download Protein FASTA342 aa · LXL04_030665|LXL04_030665|OH1004|PROTEIN
MGIDYYNVLKVNRNASEEDLKKAYRRLAMIWHPDRNPSSNKSEAEAKFKQISEAYDVLSDPKKRQIYDLYGEEALKSGQVPPPHPFSSSRGYTAHHYHTNNHQHPDPSFRFNPRDAEDIYAELFGGSDAAGGGGAGRSAARAFKDGAFRAPNGGESSSSRKAPAVENLLPCSLEDLYKGAKKKMKISRTVANSSGKLRTVEEILTIEIKPGWKKGTKITFPEKGNQEPGVIAADLIFIIDEKPHQVFTRDGNDLITNQEI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_030665 |
|---|---|
| TK1151 ID | TkA07G422480 |
| OH-1004 ID | LXL04_030665 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_030665 |
|---|---|
| Location | Chr06:120531600-120533910 (-) |
| Description | Similar to DNAJB1: DnaJ homolog subfamily B member 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000122 negative regulation of transcription by RNA polymerase II Biological Process GO:0003341 cilium movement Biological Process GO:0003351 epithelial cilium movement involved in extracellular fluid movement Biological Process GO:0006457 protein folding Biological Process GO:0006986 response to unfolded protein Biological Process GO:0007618 mating Biological Process GO:0030317 flagellated sperm motility Biological Process GO:0034605 cellular response to heat Biological Process GO:0090084 negative regulation of inclusion body assembly Biological Process GO:1900034 regulation of cellular response to heat Biological Process GO:1903334 positive regulation of protein folding Biological Process GO:1904158 axonemal central apparatus assembly Biological Process |
| KEGG gene cross-reference | bta:538426 hsa:3337 hsa:374407 mmu:69387 mmu:81489 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00226.37DnaJ4-68 aaPF01556.24DnaJ_C169-323 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_030665 | PF00226.37 | DnaJ | 4 | 68 | 1.6e-26 | 92.9 |
| LXL04_030665 | PF01556.24 | DnaJ_C | 169 | 323 | 7e-41 | 140.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.