Gene Card
Gene overview
cDNA / CDS / Protein Sequences
372 bp · LXL04_026239|LXL04_026239|OH1004|cDNA
ATGAATCCGGTTTATAAGGCCAGAATTTGTCGCGAAGATCGGTGGAAACGGAAGCTAATGCGACAGCAGAGGCGGCAACAACCGGTCTTTGATATTGGGGTTCTGCTCCCATTTCCGACTTCAATCGAGTGGCAAGATGTTGTTCAACAAGCTGTTTGTGATCCTGTTTTAGGAGATAAGGTGGAAAAGAATGTTTTTGTTGTGTTTTATTCTGGAGAAAGGGCAAAAAACATAGTGAAGGTGATACCTATCTGGAGGGG...
372 bp · LXL04_026239|LXL04_026239|OH1004|CDS
ATGAATCCGGTTTATAAGGCCAGAATTTGTCGCGAAGATCGGTGGAAACGGAAGCTAATGCGACAGCAGAGGCGGCAACAACCGGTCTTTGATATTGGGGTTCTGCTCCCATTTCCGACTTCAATCGAGTGGCAAGATGTTGTTCAACAAGCTGTTTGTGATCCTGTTTTAGGAGATAAGGTGGAAAAGAATGTTTTTGTTGTGTTTTATTCTGGAGAAAGGGCAAAAAACATAGTGAAGGTGATACCTATCTGGAGGGG...
Protein
Download Protein FASTA123 aa · LXL04_026239|LXL04_026239|OH1004|PROTEIN
MNPVYKARICREDRWKRKLMRQQRRQQPVFDIGVLLPFPTSIEWQDVVQQAVCDPVLGDKVEKNVFVVFYSGERAKNIVKVIPIWRGICPQIISCDRTWMNKAKKQKKSQQIHEKEEESIDSD
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_026239 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_026239 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:123625099-123626039 (-) | |||||||||
| Description | Similar to VHA-a2: V-type proton ATPase subunit a2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0007035 vacuolar acidification Biological Process GO:0015986 proton motive force-driven ATP synthesis Biological Process GO:1902600 proton transmembrane transport Biological Process GO:2000012 regulation of auxin polar transport Biological Process GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain Cellular Component GO:0000325 plant-type vacuole Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005773 vacuole Cellular Component GO:0005774 vacuolar membrane Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT2G21410 ath:AT4G39080 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.