Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1047 bp · LXL04_025803|LXL04_025803|OH1004|cDNA
ATGGAGGCAGCGGAAGTGGGGATGAATCGCAACAACACCGGTGATGAGCGTGAAGGGAAAGAAGCCGCACAAGGCAGTGGACAGCAGCAGCGACGCAAGGCTGGTGATCGGAAGGACCTCGCACAGATGATTGCTTACAGTACCACCTGGTTATACAGAATACTGAAAACTTTTTTTGCTGGAGAGGGATCCTCCTCTGTTCCTAGATCACGTGGAAGAAAAGATGGAGATACTATTTGGCTACCTGATGGATGGACTAT...
1047 bp · LXL04_025803|LXL04_025803|OH1004|CDS
ATGGAGGCAGCGGAAGTGGGGATGAATCGCAACAACACCGGTGATGAGCGTGAAGGGAAAGAAGCCGCACAAGGCAGTGGACAGCAGCAGCGACGCAAGGCTGGTGATCGGAAGGACCTCGCACAGATGATTGCTTACAGTACCACCTGGTTATACAGAATACTGAAAACTTTTTTTGCTGGAGAGGGATCCTCCTCTGTTCCTAGATCACGTGGAAGAAAAGATGGAGATACTATTTGGCTACCTGATGGATGGACTAT...
Protein
Download Protein FASTA348 aa · LXL04_025803|LXL04_025803|OH1004|PROTEIN
MEAAEVGMNRNNTGDEREGKEAAQGSGQQQRRKAGDRKDLAQMIAYSTTWLYRILKTFFAGEGSSSVPRSRGRKDGDTIWLPDGWTMEVEAKSSRQKYKLYIGPNEKKSISMPMVLSYLASINSSPAGQKEGPVKSQTSADKYWVEDVCCCLDSKIKMSFSCNLSFGKLVLQVFDVMSQRESKVKKQEISQDYSSQQLRVYNRFLKEGRLTGCLEKLEYLDRKGLLDMSNVMVNSRIEPNVHTYGALIDGCAKAGQIYST...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_025803 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_025803 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr05:117032918-117038266 (+) | ||||||
| Description | Similar to PGI1: Glucose-6-phosphate isomerase 1, chloroplastic | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0005982 starch metabolic process Biological Process GO:0006094 gluconeogenesis Biological Process GO:0006096 glycolytic process Biological Process GO:0009911 positive regulation of flower development Biological Process GO:0051156 glucose 6-phosphate metabolic process Biological Process GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009536 plastid Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0004347 glucose-6-phosphate isomerase activity Molecular Function GO:0048029 monosaccharide binding Molecular Function | ||||||
| KEGG gene cross-reference | ath:AT4G24620 cyc:PCC7424_3777 cyp:PCC8801_0439 mar:MAE_16590 npu:Npun_F3925 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q8H103 | Arabidopsis thaliana | Glucose-6-phosphate isomerase 1, chloroplastic | 59.259% | Swiss-Prot | weak database homology |