Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1428 bp · LXL04_024821|LXL04_024821|OH1004|cDNA
ATGGCCGCTGCTGATACCGAGAAACTAAACAAGCTTCGATCTGCCGTTTCTGGTCTCACTCAGATCAGTGATAATGAGAAATCTGGATTCATCAACCTTGTCTCCCGCTATCTAAGTGGCGAAGCACAGCATGTTGAATGGAGTAAGATCCAAACGCCAACCGACAAGATCGTTGTGCCCTATGATACCCTATCAGCCGTACCAGAAGATGCTGCTCAAACCAAGAGTCTATTGGATAAGCTTGTGGTGCTAAAGCTTAA...
1428 bp · LXL04_024821|LXL04_024821|OH1004|CDS
ATGGCCGCTGCTGATACCGAGAAACTAAACAAGCTTCGATCTGCCGTTTCTGGTCTCACTCAGATCAGTGATAATGAGAAATCTGGATTCATCAACCTTGTCTCCCGCTATCTAAGTGGCGAAGCACAGCATGTTGAATGGAGTAAGATCCAAACGCCAACCGACAAGATCGTTGTGCCCTATGATACCCTATCAGCCGTACCAGAAGATGCTGCTCAAACCAAGAGTCTATTGGATAAGCTTGTGGTGCTAAAGCTTAA...
Protein
Download Protein FASTA475 aa · LXL04_024821|LXL04_024821|OH1004|PROTEIN
MAAADTEKLNKLRSAVSGLTQISDNEKSGFINLVSRYLSGEAQHVEWSKIQTPTDKIVVPYDTLSAVPEDAAQTKSLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRNGLTFLDLIVIQIESLNKKYGCNVPLLLMNSFNTHEDTQKIVEKYSGSKIDIHTFNQSQYPRLVTDECLPLPSKGVTGKDGWYPPGHGDVFPSLMNSGKLEALLSQGKEYVFVANSDNLGAVVDLKILNHLVQNKNEYCMEVTPKTLADVKGGT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_024821 |
|---|---|
| TK1151 ID | TkA06G105310 |
| OH-1004 ID | LXL04_024821 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 98.500 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 99.368Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_024821 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:99573326-99577405 (+) | |||||||||
| Description | Similar to UGPA: UTP--glucose-1-phosphate uridylyltransferase | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0005977 glycogen metabolic process Biological Process GO:0005985 sucrose metabolic process Biological Process GO:0006011 UDP-alpha-D-glucose metabolic process Biological Process GO:0009555 pollen development Biological Process GO:0016036 cellular response to phosphate starvation Biological Process GO:0052543 callose deposition in cell wall Biological Process GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009536 plastid Cellular Component GO:0090406 pollen tube Cellular Component GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G03250 ath:AT5G17310 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01704.25UDPGP29-439 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_024821 | PF01704.25 | UDPGP | 29 | 439 | 1.2e-182 | 607.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.