Gene Card
Gene overview
cDNA / CDS / Protein Sequences
633 bp · LXL04_022302|LXL04_022302|OH1004|cDNA
ATGACCACCCTAAATGCCGACTCTACCGCCGATCACGAATTACAAGTTCCGGTTGCTGTTAAAGACAACTCGGCAGCCATTGATGGCGAAGGAGATGATGGAGAAAAGGAGTTGCATGACCTTTTATTCCCAAATGTCAATGATCTCCCCCTCTCTCCCCCTTCTGCAATCGAATTCAATTTCGTCACATACTTCGCTCCTGATTTTATGAAGCCGGAGCATGATCAATATATTTATCGCCATGCAAATGGgTTGTGTGT...
633 bp · LXL04_022302|LXL04_022302|OH1004|CDS
ATGACCACCCTAAATGCCGACTCTACCGCCGATCACGAATTACAAGTTCCGGTTGCTGTTAAAGACAACTCGGCAGCCATTGATGGCGAAGGAGATGATGGAGAAAAGGAGTTGCATGACCTTTTATTCCCAAATGTCAATGATCTCCCCCTCTCTCCCCCTTCTGCAATCGAATTCAATTTCGTCACATACTTCGCTCCTGATTTTATGAAGCCGGAGCATGATCAATATATTTATCGCCATGCAAATGGGTTGTGTGT...
Protein
Download Protein FASTA210 aa · LXL04_022302|LXL04_022302|OH1004|PROTEIN
MTTLNADSTADHELQVPVAVKDNSAAIDGEGDDGEKELHDLLFPNVNDLPLSPPSAIEFNFVTYFAPDFMKPEHDQYIYRHANGLCVIGLASGHVAFKDEGGVTSVDFNVGKSNRSEIKVTGKRKRNAQHFESNTALCKVCTNNAFYIVRCCVKGSLLEVNERLIKHPELLNSSADREGYIAILMPKPTDWLKAKDSFITLEEYKKLRNI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_022302 |
|---|---|
| TK1151 ID | TkA05G457680 |
| OH-1004 ID | LXL04_022302 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_022302 |
|---|---|
| Location | Chr04:147879950-147881294 (+) |
| Description | Similar to Abitram: Protein Abitram |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0030833 regulation of actin filament polymerization Biological Process GO:0051489 regulation of filopodium assembly Biological Process GO:0005634 nucleus Cellular Component GO:0016607 nuclear speck Cellular Component GO:0030027 lamellipodium Cellular Component GO:0032433 filopodium tip Cellular Component GO:0003785 actin monomer binding Molecular Function GO:0051015 actin filament binding Molecular Function |
| KEGG gene cross-reference | bta:507081 ddi:DDB_G0281837 dre:560419 mmu:230234 xla:443761 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.