Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1116 bp · LXL04_022282|LXL04_022282|OH1004|cDNA
ATGAATAAGACACCGTCCGACGATGAACGATCAATTTATGGCGATGTCCTCCAGGCCATCCTCTCCTACGTCCCACTCGTCCACTTACTTCTCGCTTCTGGAGTCTCAAAGTCGTGGACGGCCGCCGTATCCTCCGCCCTTCGCatctccaccaccaccaccccaTGGCTAATCGTCAACACGCAGAGCTCTAGGTACCCGTACCCGACAACGACAAACGCCTACGACCCGGAGTCAAACATGTGGATCGAGATCCGACA...
1116 bp · LXL04_022282|LXL04_022282|OH1004|CDS
ATGAATAAGACACCGTCCGACGATGAACGATCAATTTATGGCGATGTCCTCCAGGCCATCCTCTCCTACGTCCCACTCGTCCACTTACTTCTCGCTTCTGGAGTCTCAAAGTCGTGGACGGCCGCCGTATCCTCCGCCCTTCGCATCTCCACCACCACCACCCCATGGCTAATCGTCAACACGCAGAGCTCTAGGTACCCGTACCCGACAACGACAAACGCCTACGACCCGGAGTCAAACATGTGGATCGAGATCCGACA...
Protein
Download Protein FASTA371 aa · LXL04_022282|LXL04_022282|OH1004|PROTEIN
MNKTPSDDERSIYGDVLQAILSYVPLVHLLLASGVSKSWTAAVSSALRISTTTTPWLIVNTQSSRYPYPTTTNAYDPESNMWIEIRQPAIDYVSILQSSQSNLLYMLSPTKLSLSFDPLHLTWHHAAAPKVTRRDPVVAVVGRHVVVAGGAYNFEDDPLAVEVYDLQSQQWNKSDPMPEFFNGSASSLWLSVASGDSEIFIMEKSSGVTHSFNPDSNTWSGPYDLRPDYRVFNSVIGFSDDRLIVVGMLGDVEDVDGVKV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_022282 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_022282 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:147511076-147512191 (-) | |||||||||
| Description | Similar to At1g23390: F-box/kelch-repeat protein At1g23390 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000070 mitotic sister chromatid segregation Biological Process GO:0006513 protein monoubiquitination Biological Process GO:0007094 mitotic spindle assembly checkpoint signaling Biological Process GO:0010507 negative regulation of autophagy Biological Process GO:0030307 positive regulation of cell growth Biological Process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Biological Process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Biological Process GO:0051301 cell division Biological Process GO:0071233 cellular response to L-leucine Biological Process GO:1904263 positive regulation of TORC1 signaling Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G23390 ath:AT3G24760 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF25210.2Kelch_FKB95114-220 aaPF07646.22Kelch_2133-178 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_022282 | PF25210.2 | Kelch_FKB95 | 114 | 220 | 2.7e-08 | 34.5 |
| LXL04_022282 | PF07646.22 | Kelch_2 | 133 | 178 | 1.2e-07 | 32.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.