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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_021690
Reference: OH-1004 Chr: Chr04 Coordinates: 135209879-135211636 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1758 bp · LXL04_021690|LXL04_021690|OH1004|cDNA

ATGGCTATGTACTCACCTTGCTTCAAGGAAGTCGAACAAGTATGCTGCCATGGCTGCTGCTCCAACCCCCTCCTCTTCCCAACCACCGCTACAACCACAAGTACGAAACTCACCACTGCGAGTACGTCATCCGCCTGCCGGAAAAACTTCGCGAATACAACCTCTAACGCTTTCTTCGCAAACACGAATTTCACCGATCATGAATCGCTTCCTTCGTTTAAGGAATCGCTCGCGACTTTCACCCGGACGTACCCTAAGTA...

1758 bp · LXL04_021690|LXL04_021690|OH1004|CDS

ATGGCTATGTACTCACCTTGCTTCAAGGAAGTCGAACAAGTATGCTGCCATGGCTGCTGCTCCAACCCCCTCCTCTTCCCAACCACCGCTACAACCACAAGTACGAAACTCACCACTGCGAGTACGTCATCCGCCTGCCGGAAAAACTTCGCGAATACAACCTCTAACGCTTTCTTCGCAAACACGAATTTCACCGATCATGAATCGCTTCCTTCGTTTAAGGAATCGCTCGCGACTTTCACCCGGACGTACCCTAAGTA...

585 aa · LXL04_021690|LXL04_021690|OH1004|PROTEIN

MAMYSPCFKEVEQVCCHGCCSNPLLFPTTATTTSTKLTTASTSSACRKNFANTTSNAFFANTNFTDHESLPSFKESLATFTRTYPKYSDTAKVDRMRGQEYHHLSLSNRICLDYIGIGLFSHLQLQTHHPVSPSGSDLQSDFPFFSTIYKSVNLKSQLLHGGEGSEFEASVRKRIMEFMNVSGDEYSMVFTSNKSSAFKIVSEAYPFQTSNKLLTVYDYKSEAVDAMVTASEKRGAKVMSAEFKWPRMRIHSARLRKLVE...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_021690
TK1151 IDTkA05G416060
OH-1004 IDLXL04_021690
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.800
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_021690
LocationChr04:135209879-135211636 (+)
DescriptionSimilar to MOCOS: Molybdenum cofactor sulfurase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_021690 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006777 Mo-molybdopterin cofactor biosynthetic process Biological Process
GO:0032324 molybdopterin cofactor biosynthetic process Biological Process
GO:0043545 molybdopterin cofactor metabolic process Biological Process
GO:0005829 cytosol Cellular Component
GO:0008265 molybdenum cofactor sulfurtransferase activity Molecular Function
GO:0016829 lyase activity Molecular Function
GO:0030151 molybdenum ion binding Molecular Function
GO:0030170 pyridoxal phosphate binding Molecular Function
KEGG gene cross-reference
bta:281226
dan:6501972
hsa:55034
mmu:68591
sly:543832
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.767
Rank 1 · LXL04_021690 · OH-1004
Cytoplasm0.181
Rank 2 · LXL04_021690 · OH-1004
Cell membrane0.058
Rank 3 · LXL04_021690 · OH-1004
Endoplasmic reticulum0.043
Rank 4 · LXL04_021690 · OH-1004
Plastid0.027
Rank 5 · LXL04_021690 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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