Gene Card
Gene overview
cDNA / CDS / Protein Sequences
669 bp · LXL04_021285|LXL04_021285|OH1004|cDNA
ATGAAGTACTTGGAATACACCCCTTTCGAACGGATAAATGCTTTTCTAGACCACCTCAACCTTGGAGAGCGTACCATTAAGGGATGCATAGAAGCTTACTCCTGCAAGCATACAGGCTCTGATAAGAGACTATCTCTGAGTTTGGAAAATGAGATTCTTGATTATCTTGGCAACTCTCCTGATGCTGACTCACCAGCAGAATATCTTTCTAGTAGATCCAGCCGGAAGATGTTGATCTATCTGATTCTGACATTGTACCA...
669 bp · LXL04_021285|LXL04_021285|OH1004|CDS
ATGAAGTACTTGGAATACACCCCTTTCGAACGGATAAATGCTTTTCTAGACCACCTCAACCTTGGAGAGCGTACCATTAAGGGATGCATAGAAGCTTACTCCTGCAAGCATACAGGCTCTGATAAGAGACTATCTCTGAGTTTGGAAAATGAGATTCTTGATTATCTTGGCAACTCTCCTGATGCTGACTCACCAGCAGAATATCTTTCTAGTAGATCCAGCCGGAAGATGTTGATCTATCTGATTCTGACATTGTACCA...
Protein
Download Protein FASTA222 aa · LXL04_021285|LXL04_021285|OH1004|PROTEIN
MKYLEYTPFERINAFLDHLNLGERTIKGCIEAYSCKHTGSDKRLSLSLENEILDYLGNSPDADSPAEYLSSRSSRKMLIYLILTLYHMYPDYDFSAVKAHQFFTEETWDGFKQIFDSYMSDASKEWKETNEDGSLLETLYKALDEVINLAECEVYSYDPNSDADPFIEKGALWSYNFFFYNRKLKRVVCFHFSSLSNLVSDGFAFDGSYYEEDGEIFDDMDM
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_021285 |
|---|---|
| TK1151 ID | TkA05G377580 |
| OH-1004 ID | LXL04_021285 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 95.300 |
| Protein coverage (%) | TK1151 97.959 / OH-1004 86.486Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_021285 |
|---|---|
| Location | Chr04:126603686-126606116 (+) |
| Description | Similar to maf1: Repressor of RNA polymerase III transcription MAF1 homolog |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0016479 negative regulation of transcription by RNA polymerase I Biological Process GO:0016480 negative regulation of transcription by RNA polymerase III Biological Process GO:0005634 nucleus Cellular Component GO:0005654 nucleoplasm Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0048471 perinuclear region of cytoplasm Cellular Component GO:0000994 RNA polymerase III core binding Molecular Function GO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding Molecular Function GO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding Molecular Function |
| KEGG gene cross-reference | dre:406750 mmu:68877 rno:315093 xla:380400 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF09174.16Maf126-191 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_021285 | PF09174.16 | Maf1 | 26 | 191 | 5.8e-51 | 173.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.