Gene Card
Gene overview
cDNA / CDS / Protein Sequences
987 bp · LXL04_018371|LXL04_018371|OH1004|cDNA
ATGGCGAGAATCTTCAAGAACAAACCCGGATTTATGTACTCAAGGAAATCGGCTGTCTTCCCGTTTACATCTACAAGGTCGATCGAAACCCTAGCTTTCGAAGAGGCACGCTCTCCCTCCCACAAACCCATACCCGATTATTCCGCGTTTGTTCTCCATGGGTTAATGGGATCTGCCAGAAATTGGCGATCTTTCTCTCGGAATCTGGCTTCTTCCCTCTCTACCTTCTCTCCACCTTCAGATTGGAAGATGGTTCTTGT...
987 bp · LXL04_018371|LXL04_018371|OH1004|CDS
ATGGCGAGAATCTTCAAGAACAAACCCGGATTTATGTACTCAAGGAAATCGGCTGTCTTCCCGTTTACATCTACAAGGTCGATCGAAACCCTAGCTTTCGAAGAGGCACGCTCTCCCTCCCACAAACCCATACCCGATTATTCCGCGTTTGTTCTCCATGGGTTAATGGGATCTGCCAGAAATTGGCGATCTTTCTCTCGGAATCTGGCTTCTTCCCTCTCTACCTTCTCTCCACCTTCAGATTGGAAGATGGTTCTTGT...
Protein
Download Protein FASTA328 aa · LXL04_018371|LXL04_018371|OH1004|PROTEIN
MARIFKNKPGFMYSRKSAVFPFTSTRSIETLAFEEARSPSHKPIPDYSAFVLHGLMGSARNWRSFSRNLASSLSTFSPPSDWKMVLVDLRNHGRSAGLPGLNPPHDIPSAANDVANLVKTQGWNWPDVVLGHSMGGKVALQYAMSCARGDYGTSAKLPKQLWVLDSVPGIVNPEETSGEVEKVLETLKGIPKTIPSRKWLVDHLTNIGFSRSLSEWLGTNLKKSGEQETFAFDLDAIIQMFDSYREMDYWPLLEHPPKGM...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_018371 |
|---|---|
| TK1151 ID | TkA08G057690 |
| OH-1004 ID | LXL04_018371 |
| Relationship / confidence | Multi Candidate From Tk1151 / Complex relationship |
| Protein identity (%) | 99.600 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 74.695Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_018371 |
|---|---|
| Location | Chr04:12245084-12246612 (-) |
| Description | Similar to abhd11: Protein ABHD11 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006629 lipid metabolic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0005759 mitochondrial matrix Cellular Component GO:0045252 oxoglutarate dehydrogenase complex Cellular Component GO:0004806 triacylglycerol lipase activity Molecular Function GO:0016298 lipase activity Molecular Function GO:0016740 transferase activity Molecular Function GO:0052689 carboxylic ester hydrolase activity Molecular Function |
| KEGG gene cross-reference | bta:510109 dre:446169 mmu:68758 sce:YGR031W xla:735011 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF12697.14Abhydrolase_651-316 aaPF00561.27Abhydrolase_151-144 aaPF12146.16Hydrolase_480-146 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_018371 | PF12697.14 | Abhydrolase_6 | 51 | 316 | 6.8e-16 | 60.3 |
| LXL04_018371 | PF00561.27 | Abhydrolase_1 | 51 | 144 | 9.6e-13 | 49.1 |
| LXL04_018371 | PF12146.16 | Hydrolase_4 | 80 | 146 | 9.5e-07 | 29.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.