Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1716 bp · LXL04_017680|LXL04_017680|OH1004|cDNA
ATGATCGAACCTCTCCCTTTAGTCGCCTCTATTTCTCCTTCTGCTCTCTCTTTCCTTGACACCGAACTACACACTCCAGATGACCTTCTAGAAGCATCTAGACTCGTTTCCAACTTACAGAAGGACTGTCATCTCCTAGACCAAAACCTCACAGACTTACACCAAAACCTCGGATCCTATCTGCTTGCTTACTCCACACACTCAGATAAAAAGGAAAAATCAGATACTTTTTTGGGAAAGGAGTTGCCTGCACTTGCTCG...
1716 bp · LXL04_017680|LXL04_017680|OH1004|CDS
ATGATCGAACCTCTCCCTTTAGTCGCCTCTATTTCTCCTTCTGCTCTCTCTTTCCTTGACACCGAACTACACACTCCAGATGACCTTCTAGAAGCATCTAGACTCGTTTCCAACTTACAGAAGGACTGTCATCTCCTAGACCAAAACCTCACAGACTTACACCAAAACCTCGGATCCTATCTGCTTGCTTACTCCACACACTCAGATAAAAAGGAAAAATCAGATACTTTTTTGGGAAAGGAGTTGCCTGCACTTGCTCG...
Protein
Download Protein FASTA571 aa · LXL04_017680|LXL04_017680|OH1004|PROTEIN
MIEPLPLVASISPSALSFLDTELHTPDDLLEASRLVSNLQKDCHLLDQNLTDLHQNLGSYLLAYSTHSDKKEKSDTFLGKELPALAREVARVEAVRVYAETTLKLDTIVGDIEDAVSSSVNKTFRKQTFDHNSEEARFIAIKSINLAEEVLTKVTKTRPQWSRLISAVDHRVDRALAIQRPQSIADYLLTMKPNIKTQYFDSFLALCKLQQLQTIRKTRQLQGHNGNFKNMELGSQYDHDPLWAIEELVNPISISSQRHF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_017680 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_017680 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:156740097-156744352 (-) | |||||||||
| Description | Similar to MAG2: RINT1-like protein MAG2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006623 protein targeting to vacuole Biological Process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport Biological Process GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Biological Process GO:0015031 protein transport Biological Process GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0030134 COPII-coated ER to Golgi transport vesicle Cellular Component GO:0030142 COPI-coated Golgi to ER transport vesicle Cellular Component GO:0070939 Dsl1/NZR complex Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G08400 ath:AT3G47700 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.