Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1341 bp · LXL04_016766|LXL04_016766|OH1004|cDNA
ATGGTCGCAAGAACGCCACCGAAGCCGAAGAAAAAGTTGGTGGCTCCACTTGATCCAATTCAACTTACAGAAACGCTCAACAAGGTGGAGAAATGTATGGCTCGACTGCAAGAGCTTCAGTACCTCACCGGCGGGGCGAAGGTGGTCTCCGGCGTGAATCTTAGCCCTCGCAGTACCAGAGGGTACTTAAGAACAAGCCTTAGGTGTAAACAGGAATCCCTCAGGATCAGAAATGGAAATTGTCAAAAATCCTCACCTGG...
1341 bp · LXL04_016766|LXL04_016766|OH1004|CDS
ATGGTCGCAAGAACGCCACCGAAGCCGAAGAAAAAGTTGGTGGCTCCACTTGATCCAATTCAACTTACAGAAACGCTCAACAAGGTGGAGAAATGTATGGCTCGACTGCAAGAGCTTCAGTACCTCACCGGCGGGGCGAAGGTGGTCTCCGGCGTGAATCTTAGCCCTCGCAGTACCAGAGGGTACTTAAGAACAAGCCTTAGGTGTAAACAGGAATCCCTCAGGATCAGAAATGGAAATTGTCAAAAATCCTCACCTGG...
Protein
Download Protein FASTA446 aa · LXL04_016766|LXL04_016766|OH1004|PROTEIN
MVARTPPKPKKKLVAPLDPIQLTETLNKVEKCMARLQELQYLTGGAKVVSGVNLSPRSTRGYLRTSLRCKQESLRIRNGNCQKSSPGRLPSQIGEWKRMSLPAMILGETVGEILQASQFAREIVSAVETKARNITIVNGGDPITPVTGSRRKSRLNLNPEATELRVRRKREKQIIRSDPHSPLLERAKSRINFKVSGSPPKKEIETEKGRFSANKVSPKNRPWARKAVIFPNPLFHSTPTSKNQSFCRTRSPVITRTRQT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_016766 |
|---|---|
| TK1151 ID | TkA02G104630 |
| OH-1004 ID | LXL04_016766 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 85.300 |
| Protein coverage (%) | TK1151 83.730 / OH-1004 47.309Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_016766 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:133162510-133164131 (-) | |||||||||
| Description | Similar to TAN: Microtubule-binding protein TANGLED | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000911 cytokinesis by cell plate formation Biological Process GO:0000914 phragmoplast assembly Biological Process GO:2000694 regulation of phragmoplast microtubule organization Biological Process GO:0005730 nucleolus Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005819 spindle Cellular Component GO:0005829 cytosol Cellular Component GO:0005875 microtubule associated complex Cellular Component GO:0009524 phragmoplast Cellular Component GO:0009574 preprophase band Cellular Component GO:0008017 microtubule binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G05330 zma:542642 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.