Gene Card
Gene overview
cDNA / CDS / Protein Sequences
828 bp · LXL04_016571|LXL04_016571|OH1004|cDNA
ATGGGTTCTGAAAACCAGAAACCACCCATATCGGTTTGGGTTTCAGTTTTACCCCAAAACCGACTCATGCTCATCCCCAAAATCGTGGTTATTCGTGATCGGTCGTCGGAAAAAACGAGCTTAATAGAGTCACCTACGGGCCTAACTTTGCCTATTGTTGTGAAACTTGAAGACGACCCCTACGGAAAGATGAAAATCGAGCTTGATTACGAGGGGAAATTAGAAGCAATACAAAATGAAAGCCTCACAACCGAGACAAA...
828 bp · LXL04_016571|LXL04_016571|OH1004|CDS
ATGGGTTCTGAAAACCAGAAACCACCCATATCGGTTTGGGTTTCAGTTTTACCCCAAAACCGACTCATGCTCATCCCCAAAATCGTGGTTATTCGTGATCGGTCGTCGGAAAAAACGAGCTTAATAGAGTCACCTACGGGCCTAACTTTGCCTATTGTTGTGAAACTTGAAGACGACCCCTACGGAAAGATGAAAATCGAGCTTGATTACGAGGGGAAATTAGAAGCAATACAAAATGAAAGCCTCACAACCGAGACAAA...
Protein
Download Protein FASTA275 aa · LXL04_016571|LXL04_016571|OH1004|PROTEIN
MGSENQKPPISVWVSVLPQNRLMLIPKIVVIRDRSSEKTSLIESPTGLTLPIVVKLEDDPYGKMKIELDYEGKLEAIQNESLTTETKDIGTKVLTLSAKKKGFMGLLILNLPRFIWHPTGDQPHDSYTRIKEISSHKRIIILCVVLAQADFEANESTCMARVVDTTGKKTLSVSTKCDRSNENLYVKVLATSRSHDHGSACAFEETRLFENNNALTNTFSQILWCNVGVRSLAEKIGEILSDIVLENYQDLESEDRGELE...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_016571 |
|---|---|
| TK1151 ID | TkA02G122770 |
| OH-1004 ID | LXL04_016571 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 71.800 |
| Protein coverage (%) | TK1151 57.547 / OH-1004 30.909Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_016571 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:127122817-127123986 (+) | |||||||||
| Description | Similar to DRP4C: Dynamin-related protein 4C | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000266 mitochondrial fission Biological Process GO:0006816 calcium ion transport Biological Process GO:0006897 endocytosis Biological Process GO:0007005 mitochondrion organization Biological Process GO:0010468 regulation of gene expression Biological Process GO:0010637 negative regulation of mitochondrial fusion Biological Process GO:0010821 regulation of mitochondrion organization Biological Process GO:0016559 peroxisome fission Biological Process GO:0034976 response to endoplasmic reticulum stress Biological Process GO:0048312 intracellular distribution of mitochondria Biological Process GO:0048511 rhythmic process Biological Process GO:0050714 positive regulation of protein secretion Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT1G60500 ath:AT1G60530 dre:393896 hsa:10059 mmu:74006 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00350.30Dynamin_N77-176 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_016571 | PF00350.30 | Dynamin_N | 77 | 176 | 1.1e-06 | 29.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.