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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_015796
Reference: OH-1004 Chr: Chr03 Coordinates: 85579066-85580997 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

834 bp · LXL04_015796|LXL04_015796|OH1004|cDNA

ATGCGCCGTTTCCATCTACCGGTAAATTTGAGGTCGAAGGGATTTTTGATGACCATAACTCGGTTTGTGCTGAATGAACAGTCGAAGCATCCGGAGTCACGAGGGGATTTCAGTATCCTGCTCAGTAACATTGTTATAGGTTGCAAGTTCGTCTCCTCCGCTGTTAACAAGGCAGGTTTGGCAAAACTCATTGGACTTGCAGGGGAGACGAATGTGCAGGCAAAAGAACAGAAGAAATTGGACGTTCTCTCAAATGAAGT...

834 bp · LXL04_015796|LXL04_015796|OH1004|CDS

ATGCGCCGTTTCCATCTACCGGTAAATTTGAGGTCGAAGGGATTTTTGATGACCATAACTCGGTTTGTGCTGAATGAACAGTCGAAGCATCCGGAGTCACGAGGGGATTTCAGTATCCTGCTCAGTAACATTGTTATAGGTTGCAAGTTCGTCTCCTCCGCTGTTAACAAGGCAGGTTTGGCAAAACTCATTGGACTTGCAGGGGAGACGAATGTGCAGGCAAAAGAACAGAAGAAATTGGACGTTCTCTCAAATGAAGT...

277 aa · LXL04_015796|LXL04_015796|OH1004|PROTEIN

MRRFHLPVNLRSKGFLMTITRFVLNEQSKHPESRGDFSILLSNIVIGCKFVSSAVNKAGLAKLIGLAGETNVQAKEQKKLDVLSNEVFVKALVSSGRTSILVSEEDEEAIFVEKSKRGKYCVVFDPLDGSSNIECGVSIGTIFGIYMIKDGNDACIEDVLQPGKEMLAAGYCMYGSSCTLLLSTGSGVNGFTLDPSLGEFIFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKSHITKVCLSGEARIGSR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_015796
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_015796
LocationChr03:85579066-85580997 (+)
DescriptionSimilar to Fructose-1,6-bisphosphatase, cytosolic
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015796 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0005985 sucrose metabolic process Biological Process
GO:0005986 sucrose biosynthetic process Biological Process
GO:0006000 fructose metabolic process Biological Process
GO:0006002 fructose 6-phosphate metabolic process Biological Process
GO:0006094 gluconeogenesis Biological Process
GO:0015979 photosynthesis Biological Process
GO:0030388 fructose 1,6-bisphosphate metabolic process Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity Molecular Function
GO:0046872 metal ion binding Molecular Function
KEGG gene cross-reference
sot:102588954
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.528
Rank 1 · LXL04_015796 · OH-1004
Nucleus0.237
Rank 2 · LXL04_015796 · OH-1004
Endoplasmic reticulum0.144
Rank 3 · LXL04_015796 · OH-1004
Mitochondrion0.089
Rank 4 · LXL04_015796 · OH-1004
Peroxisome0.085
Rank 5 · LXL04_015796 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00316.26FBPase17-203 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_015796PF00316.26FBPase172039.5e-82274.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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